Conservation of cofitness between CSW01_00145 and CSW01_00835 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00145 branched-chain-amino-acid transaminase 1.0 CSW01_00835 HTH-type transcriptional activator IlvY 0.52 2
Pantoea sp. MT58 0.75 IAI47_01030 branched-chain amino acid transaminase 0.46 IAI47_01045 HTH-type transcriptional activator IlvY 0.77 73
Pantoea agglomerans CFBP13505 P0401 0.75 PagCFBP13505_RS20935 branched-chain amino acid transaminase 0.46 PagCFBP13505_RS20920 HTH-type transcriptional activator IlvY low > 74
Klebsiella pneumoniae MKP103 0.75 KDGMDA_09485 branched-chain amino acid transaminase 0.43 KDGMDA_09500 HTH-type transcriptional activator IlvY low > 95
Pectobacterium carotovorum WPP14 0.75 HER17_RS01070 branched-chain amino acid transaminase 0.45 HER17_RS01095 HTH-type transcriptional activator IlvY low > 75
Serratia liquefaciens MT49 0.75 IAI46_24350 branched-chain-amino-acid transaminase 0.48 IAI46_24330 HTH-type transcriptional activator IlvY low > 87
Rahnella sp. WP5 0.75 EX31_RS15000 branched-chain amino acid transaminase 0.47 EX31_RS15015 HTH-type transcriptional activator IlvY 0.80 78
Dickeya dadantii 3937 0.75 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.46 DDA3937_RS20135 HTH-type transcriptional activator IlvY 0.74 48
Dickeya dianthicola 67-19 0.74 HGI48_RS20300 branched-chain-amino-acid transaminase 0.47 HGI48_RS20275 HTH-type transcriptional activator IlvY low > 71
Dickeya dianthicola ME23 0.74 DZA65_RS21340 branched-chain amino acid transaminase 0.46 DZA65_RS21315 HTH-type transcriptional activator IlvY 0.72 21
Klebsiella michiganensis M5al 0.74 BWI76_RS00970 branched chain amino acid aminotransferase 0.43 BWI76_RS00985 transcriptional regulator IlvY 0.43 66
Escherichia coli BW25113 0.73 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.44 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) 0.88 51
Escherichia coli ECRC100 0.73 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase 0.44 OKFHMN_14630 ilvY HTH-type transcriptional activator IlvY 0.98 21
Escherichia fergusonii Becca 0.73 EFB2_04866 Branched-chain-amino-acid aminotransferase 0.44 EFB2_04863 HTH-type transcriptional regulator HdfR low > 86
Escherichia coli ECRC98 0.73 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase 0.44 JDDGAC_18250 ilvY HTH-type transcriptional activator IlvY 0.93 17
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase 0.44 OHPLBJKB_04280 HTH-type transcriptional regulator GltC low > 74
Escherichia coli ECOR38 0.73 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase 0.44 HEPCGN_13340 ilvY HTH-type transcriptional activator IlvY 0.94 31
Escherichia coli ECRC99 0.73 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase 0.44 KEDOAH_13520 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli ECRC102 0.73 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase 0.44 NIAGMN_12385 ilvY HTH-type transcriptional activator IlvY 0.92 48
Escherichia coli ECRC101 0.73 MCAODC_05150 ilvE branched-chain-amino-acid transaminase 0.44 MCAODC_05135 ilvY HTH-type transcriptional activator IlvY 0.93 13
Escherichia coli ECOR27 0.73 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase 0.44 NOLOHH_06765 ilvY HTH-type transcriptional activator IlvY 0.97 17
Escherichia coli ECRC62 0.73 BNILDI_04745 ilvE branched-chain-amino-acid transaminase 0.44 BNILDI_04760 ilvY HTH-type transcriptional activator IlvY 0.97 26
Escherichia coli Nissle 1917 0.73 ECOLIN_RS21660 branched-chain-amino-acid transaminase 0.44 ECOLIN_RS21675 HTH-type transcriptional activator IlvY low > 55
Erwinia tracheiphila SCR3 0.73 LU632_RS24405 branched-chain amino acid transaminase 0.47 LU632_RS24390 ilvY HTH-type transcriptional activator IlvY low > 73
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_09120 ilvE branched-chain amino acid transaminase 0.47 IJEDHG_09105 ilvY HTH-type transcriptional activator IlvY low > 61
Enterobacter sp. TBS_079 0.73 MPMX20_04500 Branched-chain-amino-acid aminotransferase 0.44 MPMX20_04497 HTH-type transcriptional regulator GltC 0.37 41
Erwinia amylovora T8 0.73 OLJFJH_06225 branched-chain-amino-acid transaminase 0.46 OLJFJH_06240 HTH-type transcriptional activator IlvY low > 58
Escherichia coli BL21 0.73 ECD_03648 branched-chain amino acid aminotransferase 0.44 ECD_03651 transcriptional activator of ilvC; autorepressor 0.91 22
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.43 GFF2897 HTH-type transcriptional regulator IlvY low > 78
Enterobacter asburiae PDN3 0.72 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.44 EX28DRAFT_4445 Transcriptional regulator 0.86 17
Shewanella loihica PV-4 0.67 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.45 Shew_0287 DNA-binding transcriptional regulator IlvY (RefSeq) 0.95 2
Ralstonia solanacearum PSI07 0.47 RPSI07_RS21175 branched-chain amino acid transaminase 0.13 RPSI07_RS00305 LysR family transcriptional regulator low > 81
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase 0.13 RALBFv3_RS22935 LysR family transcriptional regulator low > 76
Pseudomonas segetis P6 0.46 MPMX49_04209 Branched-chain-amino-acid aminotransferase 0.38 MPMX49_01276 HTH-type transcriptional activator CmpR low > 75
Ralstonia solanacearum UW163 0.46 UW163_RS01455 branched-chain amino acid transaminase 0.13 UW163_RS23555 LysR family transcriptional regulator — —
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS51190 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase 0.15 DQ20_RS44715 LysR substrate-binding domain-containing protein low > 101
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS10870 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase 0.14 DY961_RS08085 LysR substrate-binding domain-containing protein low > 100
Pseudomonas aeruginosa PA14 0.45 IKLFDK_28470 branched-chain-amino-acid transaminase 0.15 IKLFDK_03890 LysR family transcriptional regulator low > 98
Pseudomonas sp. S08-1 0.45 OH686_09695 branched-chain amino acid aminotransferase 0.40 OH686_08120 Transcriptional regulator IlvY, LysR family low > 80
Pseudomonas stutzeri RCH2 0.45 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.15 Psest_2671 Transcriptional regulator low > 67
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS02410 branched-chain amino acid transaminase 0.15 QEN71_RS19835 LysR family transcriptional regulator low > 153
Variovorax sp. OAS795 0.43 ABID97_RS03790 branched-chain amino acid transaminase 0.14 ABID97_RS27255 LysR substrate-binding domain-containing protein low > 91
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.15 RR42_RS02220 LysR family transcriptional regulator low > 128
Shewanella amazonensis SB2B 0.18 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) 0.48 Sama_3283 DNA-binding transcriptional regulator IlvY (RefSeq) 0.92 1
Azospirillum sp. SherDot2 0.17 MPMX19_02406 Branched-chain-amino-acid aminotransferase 0.16 MPMX19_03927 HTH-type transcriptional activator CmpR low > 112
Shewanella oneidensis MR-1 0.15 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.51 SO4350 ilvY transcriptional regulator ilvY (NCBI ptt file) 0.87 10
Shewanella sp. ANA-3 0.15 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.51 Shewana3_0354 DNA-binding transcriptional regulator IlvY (RefSeq) 0.91 2
Alteromonas macleodii MIT1002 0.15 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.41 MIT1002_04044 HTH-type transcriptional regulator GltC 0.96 27

Not shown: 72 genomes with orthologs for CSW01_00145 only; 0 genomes with orthologs for CSW01_00835 only