Conservation of cofitness between CSW01_01875 and CSW01_00765 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01875 hypothetical protein 1.0 CSW01_00765 Si-specific NAD(P)(+) transhydrogenase 0.84 17
Rahnella sp. WP5 0.66 EX31_RS04470 transcriptional regulator 0.78 EX31_RS14165 Si-specific NAD(P)(+) transhydrogenase low > 89
Dickeya dianthicola ME23 0.66 DZA65_RS20560 transcriptional regulator 0.77 DZA65_RS21445 Si-specific NAD(P)(+) transhydrogenase low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS19440 transcriptional regulator 0.77 HGI48_RS20400 Si-specific NAD(P)(+) transhydrogenase low > 71
Serratia liquefaciens MT49 0.66 IAI46_23490 transcriptional regulator 0.78 IAI46_24470 Si-specific NAD(P)(+) transhydrogenase low > 86
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_12210 Uncharacterized protein YheO 0.77 IJEDHG_13075 sthA Si-specific NAD(P)(+) transhydrogenase — —
Dickeya dadantii 3937 0.66 DDA3937_RS19340 transcriptional regulator 0.78 DDA3937_RS00975 Si-specific NAD(P)(+) transhydrogenase low > 74
Erwinia tracheiphila SCR3 0.66 LU632_RS22710 transcriptional regulator 0.77 LU632_RS19585 sthA Si-specific NAD(P)(+) transhydrogenase low > 74
Erwinia amylovora T8 0.66 OLJFJH_03930 Uncharacterized protein YheO 0.77 OLJFJH_06145 Si-specific NAD(P)(+) transhydrogenase low > 58
Pectobacterium carotovorum WPP14 0.65 HER17_RS02010 transcriptional regulator 0.78 HER17_RS00960 Si-specific NAD(P)(+) transhydrogenase low > 75
Pantoea sp. MT58 0.65 IAI47_02055 transcriptional regulator 0.77 IAI47_00935 Si-specific NAD(P)(+) transhydrogenase low > 76
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS21525 transcriptional regulator 0.77 PagCFBP13505_RS18405 Si-specific NAD(P)(+) transhydrogenase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3726 YheO-like PAS domain 0.76 GFF2348 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) low > 78
Escherichia coli ECOR38 0.64 HEPCGN_16130 yheO Uncharacterized protein YheO 0.78 HEPCGN_12205 sthA Si-specific NAD(P)(+) transhydrogenase low > 88
Escherichia fergusonii Becca 0.64 EFB2_00477 Transcriptional regulator DauR 0.78 EFB2_04650 Soluble pyridine nucleotide transhydrogenase low > 86
Escherichia coli Nissle 1917 0.64 ECOLIN_RS19165 transcriptional regulator 0.78 ECOLIN_RS22875 Si-specific NAD(P)(+) transhydrogenase low > 55
Escherichia coli ECRC99 0.64 KEDOAH_10840 yheO Uncharacterized protein YheO 0.78 KEDOAH_14600 sthA Si-specific NAD(P)(+) transhydrogenase — —
Escherichia coli ECRC98 0.64 JDDGAC_20930 yheO Uncharacterized protein YheO 0.78 JDDGAC_17185 sthA Si-specific NAD(P)(+) transhydrogenase low > 87
Escherichia coli ECRC101 0.64 MCAODC_07830 yheO Uncharacterized protein YheO 0.78 MCAODC_04060 sthA Si-specific NAD(P)(+) transhydrogenase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00357 Transcriptional regulator DauR 0.78 OHPLBJKB_04088 Soluble pyridine nucleotide transhydrogenase low > 74
Escherichia coli ECOR27 0.64 NOLOHH_09100 yheO Uncharacterized protein YheO 0.78 NOLOHH_05695 sthA Si-specific NAD(P)(+) transhydrogenase low > 76
Escherichia coli ECRC62 0.64 BNILDI_02420 yheO Uncharacterized protein YheO 0.78 BNILDI_05830 sthA Si-specific NAD(P)(+) transhydrogenase low > 75
Escherichia coli BW25113 0.64 b3346 yheO orf, hypothetical protein (VIMSS) 0.78 b3962 udhA putative oxidoreductase (VIMSS) low > 76
Escherichia coli BL21 0.64 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator 0.78 ECD_03847 pyridine nucleotide transhydrogenase, soluble low > 61
Klebsiella pneumoniae MKP103 0.64 KDGMDA_06760 Uncharacterized protein YheO 0.79 KDGMDA_09385 Si-specific NAD(P)(+) transhydrogenase low > 95
Escherichia coli ECRC102 0.64 NIAGMN_15070 yheO Uncharacterized protein YheO 0.78 NIAGMN_11310 sthA Si-specific NAD(P)(+) transhydrogenase low > 80
Escherichia coli ECRC100 0.64 OKFHMN_17300 yheO Uncharacterized protein YheO 0.78 OKFHMN_13560 sthA Si-specific NAD(P)(+) transhydrogenase — —
Klebsiella michiganensis M5al 0.64 BWI76_RS25905 hypothetical protein 0.79 BWI76_RS00870 NAD(P)(+) transhydrogenase — —
Enterobacter sp. TBS_079 0.64 MPMX20_04239 Transcriptional regulator DauR 0.79 MPMX20_04518 Soluble pyridine nucleotide transhydrogenase low > 85
Enterobacter asburiae PDN3 0.64 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria 0.79 EX28DRAFT_4425 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes low > 76
Acinetobacter baumannii LAC-4 0.18 RR41_RS05440 PAS domain-containing protein 0.58 RR41_RS05755 Si-specific NAD(P)(+) transhydrogenase low > 55
Rhizobium sp. OAE497 0.16 ABIE40_RS21180 PAS domain-containing protein 0.35 ABIE40_RS08610 Si-specific NAD(P)(+) transhydrogenase low > 107
Pseudomonas sp. BP01 0.16 JOY50_RS24520 transcriptional regulator 0.61 JOY50_RS25115 sthA Si-specific NAD(P)(+) transhydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_04640 hypothetical protein 0.61 AO353_00390 pyridine nucleotide-disulfide oxidoreductase — —
Pseudomonas putida KT2440 0.16 PP_2931 conserved protein of unknown function 0.61 PP_2151 soluble pyridine nucleotide transhydrogenase — —
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1693 YheO-like PAS domain 0.61 PfGW456L13_4024 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) — —
Pseudomonas fluorescens SBW25 0.15 PFLU_RS13585 DNA-binding protein 0.62 PFLU_RS07725 Si-specific NAD(P)(+) transhydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS13585 DNA-binding protein 0.62 PFLU_RS07725 Si-specific NAD(P)(+) transhydrogenase low > 109
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_923 YheO-like PAS domain 0.61 Pf1N1B4_3919 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) — —
Pseudomonas sp. SVBP6 0.15 COO64_RS25095 transcriptional regulator 0.62 COO64_RS09475 sthA Si-specific NAD(P)(+) transhydrogenase — —
Pseudomonas aeruginosa PA14 0.15 IKLFDK_19905 Transcriptional regulator DauR 0.63 IKLFDK_15220 Si-specific NAD(P)(+) transhydrogenase — —
Pseudomonas simiae WCS417 0.15 PS417_12915 DNA-binding protein 0.61 PS417_07650 pyridine nucleotide-disulfide oxidoreductase — —
Pseudomonas sp. DMC3 0.15 GFF1929 Transcriptional regulator DauR 0.61 GFF1289 Soluble pyridine nucleotide transhydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_5396 YheO-like PAS domain 0.61 Pf6N2E2_2274 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) low > 103
Pseudomonas sp. S08-1 0.14 OH686_07030 YheO-like PAS domain 0.62 OH686_22005 Soluble pyridine nucleotide transhydrogenase low > 80
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_17355 hypothetical protein 0.61 AO356_02250 pyridine nucleotide-disulfide oxidoreductase low > 104
Sinorhizobium meliloti 1021 0.13 SMc04327 hypothetical protein 0.35 SMc00300 soluble pyridine nucleotide transhydrogenase low > 103
Pseudomonas sp. RS175 0.13 PFR28_03547 Transcriptional regulator DauR 0.61 PFR28_01127 Soluble pyridine nucleotide transhydrogenase low > 88

Not shown: 17 genomes with orthologs for CSW01_01875 only; 11 genomes with orthologs for CSW01_00765 only