Conservation of cofitness between CSW01_14255 and CSW01_00560 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14255 sodium/glutamate symporter 1.0 CSW01_00560 DNA polymerase I 0.72 7
Shewanella loihica PV-4 0.70 Shew_0103 sodium/glutamate symporter (RefSeq) 0.63 Shew_3714 DNA polymerase I (RefSeq) low > 60
Shewanella oneidensis MR-1 0.70 SO2923 gltS sodium/glutamate symporter (NCBI ptt file) 0.62 SO4669 polA DNA polymerase I (NCBI ptt file) — —
Shewanella sp. ANA-3 0.67 Shewana3_1541 sodium/glutamate symporter (RefSeq) 0.62 Shewana3_4109 DNA polymerase I (RefSeq) — —
Acinetobacter radioresistens SK82 0.41 MPMX26_00622 Sodium/glutamate symporter 0.46 MPMX26_00574 DNA polymerase I low > 36
Acinetobacter baumannii LAC-4 0.40 RR41_RS06505 sodium/glutamate symporter 0.46 RR41_RS15915 DNA polymerase I — —
Paraburkholderia graminis OAS925 0.40 ABIE53_001025 ESS family glutamate:Na+ symporter 0.51 ABIE53_004852 DNA polymerase-1 low > 113
Pseudomonas sp. DMC3 0.40 GFF413 Sodium/glutamate symporter 0.55 GFF631 DNA polymerase I low > 89
Pseudomonas putida KT2440 0.39 PP_0996 glutamate:sodium symporter 0.58 PP_0123 DNA polymerase I, 5 low > 96
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_786 Sodium/glutamate symport protein 0.54 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) low > 87
Escherichia coli ECOR38 0.38 HEPCGN_10820 gltS sodium/glutamate symporter 0.64 HEPCGN_12785 polA DNA polymerase I — —
Escherichia coli ECRC62 0.38 BNILDI_09425 gltS sodium/glutamate symporter 0.64 BNILDI_05250 polA DNA polymerase I — —
Klebsiella michiganensis M5al 0.38 BWI76_RS27520 sodium/glutamate symporter 0.63 BWI76_RS00355 DNA polymerase I low > 92
Klebsiella pneumoniae MRSN742743 0.38 GJGHJB_00102 gltS sodium/glutamate symporter 0.63 GJGHJB_04975 polA DNA polymerase I low > 83
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_12510 sodium:glutamate symporter 0.55 AO356_11465 DNA polymerase I low > 104
Enterobacter sp. TBS_079 0.38 MPMX20_00083 Sodium/glutamate symporter 0.64 MPMX20_04601 DNA polymerase I low > 85
Enterobacter asburiae PDN3 0.38 EX28DRAFT_3902 sodium--glutamate symport carrier (gltS) 0.64 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) — —
Klebsiella pneumoniae MKP103 0.38 KDGMDA_08195 sodium/glutamate symporter 0.63 KDGMDA_08970 DNA polymerase I — —
Serratia liquefaciens MT49 0.37 IAI46_24910 sodium/glutamate symporter 0.66 IAI46_24985 DNA polymerase I low > 87
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_4368 Sodium/glutamate symport protein 0.54 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas sp. BP01 0.37 JOY50_RS11320 gltS sodium/glutamate symporter 0.58 JOY50_RS21110 polA DNA polymerase I low > 84
Escherichia coli BL21 0.37 ECD_03511 glutamate transporter 0.64 ECD_03749 5 — —
Escherichia coli BW25113 0.37 b3653 gltS glutamate transporter (NCBI) 0.64 b3863 polA DNA polymerase I (NCBI) low > 76
Escherichia coli ECRC100 0.37 OKFHMN_15535 gltS sodium/glutamate symporter 0.64 OKFHMN_14150 polA DNA polymerase I — —
Escherichia coli ECRC102 0.37 NIAGMN_13295 gltS sodium/glutamate symporter 0.64 NIAGMN_11905 polA DNA polymerase I — —
Escherichia coli ECOR27 0.37 NOLOHH_07420 gltS sodium/glutamate symporter 0.64 NOLOHH_06280 polA DNA polymerase I — —
Escherichia coli ECRC99 0.37 KEDOAH_12610 gltS sodium/glutamate symporter 0.64 KEDOAH_14000 polA DNA polymerase I — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_00048 Sodium/glutamate symporter 0.64 OHPLBJKB_04189 DNA polymerase I — —
Escherichia coli ECRC101 0.37 MCAODC_06045 gltS sodium/glutamate symporter 0.64 MCAODC_04650 polA DNA polymerase I — —
Escherichia coli ECRC98 0.37 JDDGAC_19160 gltS sodium/glutamate symporter 0.64 JDDGAC_17775 polA DNA polymerase I — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS20805 sodium/glutamate symporter 0.64 ECOLIN_RS22270 DNA polymerase I — —
Escherichia fergusonii Becca 0.36 EFB2_00135 Sodium/glutamate symporter 0.64 EFB2_04753 DNA polymerase I — —
Rahnella sp. WP5 0.36 EX31_RS15830 sodium/glutamate symporter 0.65 EX31_RS15905 DNA polymerase I low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF353 Sodium/glutamate symport protein 0.63 GFF2216 DNA polymerase I (EC 2.7.7.7) low > 78
Fusobacterium nucleatum SB010 0.33 HUW76_04790 sodium/glutamate symporter 0.26 HUW76_04385 DNA polymerase I low > 35
Synechocystis sp000284455 PCC 6803 0.32 SGL_RS05620 sodium/glutamate symporter 0.28 SGL_RS16290 DNA polymerase I — —
Phaeobacter inhibens DSM 17395 0.27 PGA1_c06490 sodium/glutamate symport carrier protein GltS 0.39 PGA1_c31780 DNA polymerase I low > 62
Xanthobacter sp. DMC5 0.27 GFF4710 Sodium/glutamate symporter 0.37 GFF1973 DNA polymerase I — —
Dinoroseobacter shibae DFL-12 0.26 Dshi_1261 sodium/glutamate symporter (RefSeq) 0.39 Dshi_2909 DNA polymerase I (RefSeq) low > 64
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF4102 Sodium/glutamate symporter 0.45 GFF5584 DNA polymerase I (EC 2.7.7.7) low > 90

Not shown: 1 genomes with orthologs for CSW01_14255 only; 78 genomes with orthologs for CSW01_00560 only