Conservation of cofitness between CSW01_07570 and CSW01_00475 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07570 nucleotide-binding protein 1.0 CSW01_00475 cytochrome C biogenesis protein CcsA 0.55 12
Shewanella sp. ANA-3 0.64 Shewana3_0782 putative nucleotide-binding protein (RefSeq) 0.62 Shewana3_2425 di-haem cytochrome c peroxidase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO3815 conserved hypothetical protein (NCBI ptt file) 0.61 SO2178 ccpA cytochrome c551 peroxidase (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.60 MIT1002_04129 putative nucleotide-binding protein 0.18 MIT1002_00927 Cytochrome c551 peroxidase precursor low > 70
Marinobacter adhaerens HP15 0.58 HP15_2364 nucleotide-binding protein 0.13 HP15_3173 Di-heme cytochrome c peroxidase low > 73
Pseudomonas aeruginosa PA14 0.55 IKLFDK_02120 YajQ family cyclic di-GMP-binding protein 0.44 IKLFDK_00580 Cytochrome c551 peroxidase low > 98
Pseudomonas aeruginosa MRSN321 0.55 DY961_RS24510 YajQ family cyclic di-GMP-binding protein 0.44 DY961_RS23500 ccpA;inference=COORDINATES cytochrome-c peroxidase CcpA low > 100
Pseudomonas aeruginosa PUPa3 0.55 DQ20_RS56960 YajQ family cyclic di-GMP-binding protein 0.44 DQ20_RS55965 ccpA;inference=COORDINATES cytochrome-c peroxidase CcpA low > 101
Pseudomonas lactucae CFBP13502 0.52 GEMAOFIL_04654 hypothetical protein 0.33 GEMAOFIL_01274 Cytochrome c551 peroxidase low > 96
Pseudomonas simiae WCS417 0.52 PS417_22510 nucleotide-binding protein 0.35 PS417_05430 cytochrome B6 — —
Pseudomonas putida KT2440 0.52 PP_1352 UPF0234 protein PP_1352 0.33 PP_2943 putative Cytochrome c551 peroxidase low > 96
Pseudomonas fluorescens SBW25 0.52 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein 0.35 PFLU_RS05515 c-type cytochrome low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein 0.35 PFLU_RS05515 c-type cytochrome low > 109
Pseudomonas orientalis W4I3 0.52 QF045_RS24675 YajQ family cyclic di-GMP-binding protein 0.36 QF045_RS08370 cytochrome c peroxidase low > 93
Pseudomonas sp. RS175 0.52 PFR28_03425 hypothetical protein 0.36 PFR28_03485 Cytochrome c551 peroxidase low > 88
Pseudomonas stutzeri RCH2 0.52 Psest_1142 Uncharacterized protein conserved in bacteria 0.42 Psest_3397 Cytochrome c peroxidase low > 67
Pseudomonas sp. SVBP6 0.51 COO64_RS11975 YajQ family cyclic di-GMP-binding protein 0.36 COO64_RS20900 cytochrome-c peroxidase low > 93
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_03640 nucleotide-binding protein 0.33 AO353_16175 cytochrome B6 low > 101
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_17960 nucleotide-binding protein 0.36 AO356_17700 cytochrome B6 low > 104
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_5522 FIG001943: hypothetical protein YajQ 0.35 Pf6N2E2_5464 Cytochrome c551 peroxidase (EC 1.11.1.5) low > 103
Rhodanobacter denitrificans MT42 0.49 LRK55_RS14390 YajQ family cyclic di-GMP-binding protein 0.43 LRK55_RS16130 cytochrome-c peroxidase low > 63
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS14675 YajQ family cyclic di-GMP-binding protein 0.42 LRK54_RS16380 cytochrome-c peroxidase low > 59
Magnetospirillum magneticum AMB-1 0.48 AMB_RS18375 nucleotide-binding protein 0.73 AMB_RS14190 cytochrome C biogenesis protein CcsA low > 64
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS07165 nucleotide-binding protein 0.69 HSERO_RS21385 cytochrome C biogenesis protein CcsA low > 78
Azospirillum sp. SherDot2 0.44 MPMX19_04413 hypothetical protein 0.41 MPMX19_02394 Cytochrome c551 peroxidase low > 112
Azospirillum brasilense Sp245 0.43 AZOBR_RS21810 nucleotide-binding protein 0.74 AZOBR_RS02510 cytochrome C biogenesis protein CcsA low > 97
Dechlorosoma suillum PS 0.40 Dsui_3245 hypothetical protein 0.73 Dsui_1166 cytochrome c peroxidase low > 51

Not shown: 70 genomes with orthologs for CSW01_07570 only; 5 genomes with orthologs for CSW01_00475 only