Conservation of cofitness between CSW01_07480 and CSW01_00215 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07480 ribosomal RNA large subunit methyltransferase K/L 1.0 CSW01_00215 potassium uptake protein TrkH 0.69 10
Shewanella loihica PV-4 0.50 Shew_1812 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.57 Shew_3740 TrkH family potassium uptake protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.50 Sama_1600 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.59 Sama_0039 potassium uptake protein TrkH (RefSeq) low > 62
Shewanella oneidensis MR-1 0.49 SO1851 conserved hypothetical protein (NCBI ptt file) 0.56 SO0028 trkH-2 potassium uptake protein TrkH (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.49 Shewana3_1601 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.56 Shewana3_0031 TrkH family potassium uptake protein (RefSeq) low > 73
Pseudomonas sp. BP01 0.42 JOY50_RS22095 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.49 JOY50_RS01110 TrkH family potassium uptake protein low > 84
Pseudomonas stutzeri RCH2 0.42 Psest_1949 Predicted N6-adenine-specific DNA methylase 0.48 Psest_1879 Trk-type K+ transport systems, membrane components low > 67
Pseudomonas putida KT2440 0.42 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase 0.50 PP_3953 potassium transporter low > 96
Pseudomonas sp. SVBP6 0.42 COO64_RS05295 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.50 COO64_RS21795 TrkH family potassium uptake protein low > 93
Pseudomonas sp. DMC3 0.42 GFF5254 Ribosomal RNA large subunit methyltransferase K/L 0.51 GFF2771 Trk system potassium uptake protein TrkI low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase 0.47 Psyr_3593 K+ transporter Trk low > 86
Pseudomonas lactucae CFBP13502 0.42 GEMAOFIL_04331 Ribosomal RNA large subunit methyltransferase K/L 0.48 GEMAOFIL_04576 Trk system potassium uptake protein TrkI low > 96
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase 0.47 Psyr_3593 K+ transporter Trk low > 86
Pseudomonas aeruginosa MRSN321 0.42 DY961_RS01710 rlmKL;go_function=RNA bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.48 DY961_RS00865 TrkH family potassium uptake protein low > 100
Pseudomonas aeruginosa PA14 0.42 IKLFDK_15510 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.49 IKLFDK_09050 potassium transporter TrkH low > 98
Pseudomonas aeruginosa PUPa3 0.42 DQ20_RS33860 rlmKL;go_function=RNA bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.48 DQ20_RS40175 TrkH family potassium uptake protein low > 101
Pseudomonas segetis P6 0.41 ACVTMO_RS14985 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.50 ACVTMO_RS14485 TrkH family potassium uptake protein low > 75
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_3844 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.48 Pf1N1B4_3543 Potassium uptake protein TrkH low > 87
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4094 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.49 PfGW456L13_4413 Potassium uptake protein TrkH low > 87
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.47 PFLU_RS23830 TrkH family potassium uptake protein low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.47 PFLU_RS23830 TrkH family potassium uptake protein low > 109
Pseudomonas simiae WCS417 0.41 PS417_20930 50S rRNA methyltransferase 0.49 PS417_22205 potassium transporter TrkH low > 88
Pseudomonas orientalis W4I3 0.41 QF045_RS22735 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.49 QF045_RS24335 TrkH family potassium uptake protein low > 93
Pseudomonas sp. RS175 0.41 PFR28_01055 Ribosomal RNA large subunit methyltransferase K/L 0.49 PFR28_00798 Trk system potassium uptake protein TrkI low > 88
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_00775 50S rRNA methyltransferase 0.50 AO353_18480 potassium transporter TrkH low > 101
Pseudomonas sp. S08-1 0.41 OH686_03110 23S rRNA (guanine(2445)-N(2))-methyltransferase / 23S rRNA (guanine(2069)-N(7))-methyltransferase 0.50 OH686_20750 Trk potassium uptake system protein TrkH — —
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2346 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.48 Pf6N2E2_2634 Potassium uptake protein TrkH low > 103
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_02605 50S rRNA methyltransferase 0.48 AO356_03995 potassium transporter TrkH low > 104
Marinobacter adhaerens HP15 0.38 HP15_1379 RNA methylase 0.43 HP15_1705 potassium uptake protein, TrkH family — —

Not shown: 40 genomes with orthologs for CSW01_07480 only; 16 genomes with orthologs for CSW01_00215 only