Conservation of cofitness between CSW01_02835 and CSW01_00215 in Vibrio cholerae E7946 ATCC 55056

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02835 RNA polymerase sigma factor RpoS 1.0 CSW01_00215 potassium uptake protein TrkH 0.91 3
Shewanella loihica PV-4 0.68 Shew_1213 RpoD family RNA polymerase sigma factor (RefSeq) 0.57 Shew_3740 TrkH family potassium uptake protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.68 Sama_1044 RNA polymerase sigma-38 factor (RefSeq) 0.59 Sama_0039 potassium uptake protein TrkH (RefSeq) low > 62
Shewanella oneidensis MR-1 0.66 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) 0.56 SO0028 trkH-2 potassium uptake protein TrkH (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.66 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) 0.56 Shewana3_0031 TrkH family potassium uptake protein (RefSeq) low > 73
Pseudomonas putida KT2440 0.63 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.50 PP_3953 potassium transporter low > 96
Pseudomonas sp. BP01 0.63 JOY50_RS23755 rpoS RNA polymerase sigma factor RpoS 0.49 JOY50_RS01110 TrkH family potassium uptake protein low > 84
Pseudomonas sp. SVBP6 0.63 COO64_RS19795 rpoS RNA polymerase sigma factor RpoS 0.50 COO64_RS21795 TrkH family potassium uptake protein low > 93
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_16615 RNA polymerase sigma factor RpoS 0.50 AO353_18480 potassium transporter TrkH low > 101
Pseudomonas sp. S08-1 0.62 OH686_18185 RNA polymerase sigma factor RpoS 0.50 OH686_20750 Trk potassium uptake system protein TrkH
Pseudomonas sp. RS175 0.62 PFR28_00427 RNA polymerase sigma factor RpoS 0.49 PFR28_00798 Trk system potassium uptake protein TrkI low > 88
Pseudomonas sp. DMC3 0.62 GFF2084 RNA polymerase sigma factor RpoS 0.51 GFF2771 Trk system potassium uptake protein TrkI low > 89
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS06430 RNA polymerase sigma factor RpoS 0.47 PFLU_RS23830 TrkH family potassium uptake protein low > 109
Marinobacter adhaerens HP15 0.62 HP15_1283 RNA polymerase, sigma 70 subunit, RpoD family 0.43 HP15_1705 potassium uptake protein, TrkH family
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_05885 RNA polymerase sigma factor RpoS 0.48 AO356_03995 potassium transporter TrkH low > 104
Pseudomonas fluorescens SBW25 0.62 PFLU_RS06430 RNA polymerase sigma factor RpoS 0.47 PFLU_RS23830 TrkH family potassium uptake protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_3037 RNA polymerase sigma factor RpoS 0.48 Pf6N2E2_2634 Potassium uptake protein TrkH low > 103
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4674 RNA polymerase sigma factor RpoS 0.49 PfGW456L13_4413 Potassium uptake protein TrkH low > 87
Pseudomonas simiae WCS417 0.62 PS417_06365 RNA polymerase sigma factor 0.49 PS417_22205 potassium transporter TrkH low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS 0.47 Psyr_3593 K+ transporter Trk low > 86
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS 0.47 Psyr_3593 K+ transporter Trk 0.36 55
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_3115 RNA polymerase sigma factor RpoS 0.48 Pf1N1B4_3543 Potassium uptake protein TrkH low > 87
Pseudomonas aeruginosa PA14 0.62 IKLFDK_18495 RNA polymerase sigma factor RpoS 0.49 IKLFDK_09050 potassium transporter TrkH low > 101
Pseudomonas stutzeri RCH2 0.61 Psest_2806 RNA polymerase sigma factor RpoS 0.48 Psest_1879 Trk-type K+ transport systems, membrane components low > 67

Not shown: 32 genomes with orthologs for CSW01_02835 only; 16 genomes with orthologs for CSW01_00215 only