Conservation of cofitness between CSW01_00835 and CSW01_00145 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00835 HTH-type transcriptional activator IlvY 1.0 CSW01_00145 branched-chain-amino-acid transaminase 0.52 5
Shewanella oneidensis MR-1 0.51 SO4350 ilvY transcriptional regulator ilvY (NCBI ptt file) 0.15 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.87 54
Shewanella sp. ANA-3 0.51 Shewana3_0354 DNA-binding transcriptional regulator IlvY (RefSeq) 0.15 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.91 42
Serratia liquefaciens MT49 0.48 IAI46_24330 HTH-type transcriptional activator IlvY 0.75 IAI46_24350 branched-chain-amino-acid transaminase low > 87
Shewanella amazonensis SB2B 0.48 Sama_3283 DNA-binding transcriptional regulator IlvY (RefSeq) 0.18 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) 0.92 1
Rahnella sp. WP5 0.47 EX31_RS15015 HTH-type transcriptional activator IlvY 0.75 EX31_RS15000 branched-chain amino acid transaminase 0.80 82
Erwinia tracheiphila SCR3 0.47 LU632_RS24390 ilvY HTH-type transcriptional activator IlvY 0.73 LU632_RS24405 branched-chain amino acid transaminase low > 73
Erwinia tracheiphila HP pepo 2.2 0.47 IJEDHG_09105 ilvY HTH-type transcriptional activator IlvY 0.73 IJEDHG_09120 ilvE branched-chain amino acid transaminase low > 61
Dickeya dianthicola 67-19 0.47 HGI48_RS20275 HTH-type transcriptional activator IlvY 0.74 HGI48_RS20300 branched-chain-amino-acid transaminase low > 71
Erwinia amylovora T8 0.46 OLJFJH_06240 HTH-type transcriptional activator IlvY 0.73 OLJFJH_06225 branched-chain-amino-acid transaminase low > 58
Dickeya dianthicola ME23 0.46 DZA65_RS21315 HTH-type transcriptional activator IlvY 0.74 DZA65_RS21340 branched-chain amino acid transaminase 0.72 1
Dickeya dadantii 3937 0.46 DDA3937_RS20135 HTH-type transcriptional activator IlvY 0.75 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.74 17
Pantoea sp. MT58 0.46 IAI47_01045 HTH-type transcriptional activator IlvY 0.75 IAI47_01030 branched-chain amino acid transaminase 0.77 37
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS20920 HTH-type transcriptional activator IlvY 0.75 PagCFBP13505_RS20935 branched-chain amino acid transaminase low > 74
Shewanella loihica PV-4 0.45 Shew_0287 DNA-binding transcriptional regulator IlvY (RefSeq) 0.67 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.95 30
Pectobacterium carotovorum WPP14 0.45 HER17_RS01095 HTH-type transcriptional activator IlvY 0.75 HER17_RS01070 branched-chain amino acid transaminase 0.77 75
Escherichia coli ECOR27 0.44 NOLOHH_06765 ilvY HTH-type transcriptional activator IlvY 0.73 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase 0.97 12
Escherichia coli BL21 0.44 ECD_03651 transcriptional activator of ilvC; autorepressor 0.73 ECD_03648 branched-chain amino acid aminotransferase 0.91 9
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_04280 HTH-type transcriptional regulator GltC 0.73 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 74
Escherichia coli ECRC98 0.44 JDDGAC_18250 ilvY HTH-type transcriptional activator IlvY 0.73 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase 0.93 5
Escherichia coli ECRC102 0.44 NIAGMN_12385 ilvY HTH-type transcriptional activator IlvY 0.73 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase 0.92 46
Escherichia coli ECRC100 0.44 OKFHMN_14630 ilvY HTH-type transcriptional activator IlvY 0.73 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase 0.98 26
Escherichia coli BW25113 0.44 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) 0.73 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.88 9
Escherichia coli ECRC101 0.44 MCAODC_05135 ilvY HTH-type transcriptional activator IlvY 0.73 MCAODC_05150 ilvE branched-chain-amino-acid transaminase 0.93 4
Escherichia coli ECRC99 0.44 KEDOAH_13520 ilvY HTH-type transcriptional activator IlvY 0.73 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Enterobacter asburiae PDN3 0.44 EX28DRAFT_4445 Transcriptional regulator 0.72 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.86 5
Escherichia coli Nissle 1917 0.44 ECOLIN_RS21675 HTH-type transcriptional activator IlvY 0.73 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 55
Escherichia coli ECRC62 0.44 BNILDI_04760 ilvY HTH-type transcriptional activator IlvY 0.73 BNILDI_04745 ilvE branched-chain-amino-acid transaminase 0.97 14
Escherichia coli ECOR38 0.44 HEPCGN_13340 ilvY HTH-type transcriptional activator IlvY 0.73 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase 0.94 31
Escherichia fergusonii Becca 0.44 EFB2_04863 HTH-type transcriptional regulator HdfR 0.73 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Enterobacter sp. TBS_079 0.44 MPMX20_04497 HTH-type transcriptional regulator GltC 0.73 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF2897 HTH-type transcriptional regulator IlvY 0.73 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Klebsiella michiganensis M5al 0.43 BWI76_RS00985 transcriptional regulator IlvY 0.74 BWI76_RS00970 branched chain amino acid aminotransferase low > 92
Klebsiella pneumoniae MKP103 0.43 KDGMDA_09500 HTH-type transcriptional activator IlvY 0.75 KDGMDA_09485 branched-chain amino acid transaminase low > 95
Alteromonas macleodii MIT1002 0.41 MIT1002_04044 HTH-type transcriptional regulator GltC 0.15 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.96 14
Pseudomonas sp. S08-1 0.40 OH686_08120 Transcriptional regulator IlvY, LysR family 0.45 OH686_09695 branched-chain amino acid aminotransferase low > 80
Pseudomonas segetis P6 0.38 MPMX49_01276 HTH-type transcriptional activator CmpR 0.46 MPMX49_04209 Branched-chain-amino-acid aminotransferase low > 75
Azospirillum sp. SherDot2 0.16 MPMX19_03927 HTH-type transcriptional activator CmpR 0.17 MPMX19_02406 Branched-chain-amino-acid aminotransferase low > 112
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS19835 LysR family transcriptional regulator 0.45 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Pseudomonas stutzeri RCH2 0.15 Psest_2671 Transcriptional regulator 0.45 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 67
Pseudomonas aeruginosa PA14 0.15 IKLFDK_03890 LysR family transcriptional regulator 0.45 IKLFDK_28470 branched-chain-amino-acid transaminase low > 98
Pseudomonas aeruginosa PUPa3 0.15 DQ20_RS44715 LysR substrate-binding domain-containing protein 0.45 DQ20_RS51190 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase low > 101
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS02220 LysR family transcriptional regulator 0.19 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 128
Pseudomonas aeruginosa MRSN321 0.14 DY961_RS08085 LysR substrate-binding domain-containing protein 0.45 DY961_RS10870 ilvE;go_function=branched-chain-amino-acid branched-chain-amino-acid transaminase low > 100
Variovorax sp. OAS795 0.14 ABID97_RS27255 LysR substrate-binding domain-containing protein 0.43 ABID97_RS03790 branched-chain amino acid transaminase low > 91
Ralstonia solanacearum PSI07 0.13 RPSI07_RS00305 LysR family transcriptional regulator 0.47 RPSI07_RS21175 branched-chain amino acid transaminase low > 81
Ralstonia solanacearum UW163 0.13 UW163_RS23555 LysR family transcriptional regulator 0.46 UW163_RS01455 branched-chain amino acid transaminase — —
Ralstonia solanacearum IBSBF1503 0.13 RALBFv3_RS22935 LysR family transcriptional regulator 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase low > 76

Not shown: 0 genomes with orthologs for CSW01_00835 only; 72 genomes with orthologs for CSW01_00145 only