Conservation of cofitness between BWI76_RS00940 and BWI76_RS11870 in Klebsiella michiganensis M5al

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Klebsiella michiganensis M5al 1.0 BWI76_RS00940 transcriptional regulator HdfR 1.0 BWI76_RS11870 hypothetical protein 0.32 12
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2907 HTH-type transcriptional regulator hdfR 0.95 GFF2720 Hypothetical YciO protein, TsaC/YrdC paralog low > 78
Escherichia coli BL21 0.83 ECD_03642 flhDC operon transcriptional repressor 0.94 ECD_01241 putative RNA binding protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_04288 HTH-type transcriptional regulator HdfR 0.94 OHPLBJKB_02417 putative protein YciO low > 73
Escherichia coli BW25113 0.83 b4480 hdfR transcriptional regulator HdfR (NCBI) 0.94 b1267 yciO orf, hypothetical protein (VIMSS) — —
Escherichia coli ECOR38 0.82 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR 0.94 HEPCGN_25550 yciO L-threonylcarbamoyladenylate synthase low > 87
Escherichia fergusonii Becca 0.82 EFB2_04871 HTH-type transcriptional regulator HdfR 0.94 EFB2_02660 putative protein YciO low > 86
Escherichia coli Nissle 1917 0.82 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR 0.94 ECOLIN_RS07625 L-threonylcarbamoyladenylate synthase — —
Escherichia coli ECRC62 0.82 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR 0.94 BNILDI_18450 yciO L-threonylcarbamoyladenylate synthase low > 75
Escherichia coli ECRC100 0.82 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR 0.94 OKFHMN_02640 yciO L-threonylcarbamoyladenylate synthase low > 80
Escherichia coli ECRC101 0.82 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR 0.94 MCAODC_15625 yciO L-threonylcarbamoyladenylate synthase low > 87
Escherichia coli ECRC98 0.82 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR 0.94 JDDGAC_05185 yciO L-threonylcarbamoyladenylate synthase low > 86
Escherichia coli ECRC99 0.82 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR 0.94 KEDOAH_26110 yciO L-threonylcarbamoyladenylate synthase — —
Escherichia coli ECOR27 0.82 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR 0.94 NOLOHH_20300 yciO L-threonylcarbamoyladenylate synthase low > 75
Escherichia coli ECRC102 0.82 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR 0.94 NIAGMN_26810 yciO L-threonylcarbamoyladenylate synthase — —
Enterobacter sp. TBS_079 0.82 MPMX20_04505 HTH-type transcriptional regulator HdfR 0.94 MPMX20_02508 putative protein YciO low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_4436 Transcriptional regulator 0.94 EX28DRAFT_0939 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family low > 76
Pantoea sp. MT58 0.64 IAI47_01000 HTH-type transcriptional regulator HdfR 0.78 IAI47_09200 threonylcarbamoyl-AMP synthase low > 76
Pectobacterium carotovorum WPP14 0.64 HER17_RS01040 HTH-type transcriptional regulator HdfR 0.81 HER17_RS10905 threonylcarbamoyl-AMP synthase low > 75
Erwinia tracheiphila SCR3 0.64 LU632_RS24450 hdfR HTH-type transcriptional regulator HdfR 0.81 LU632_RS12745 threonylcarbamoyl-AMP synthase low > 74
Serratia liquefaciens MT49 0.63 IAI46_24385 HTH-type transcriptional regulator HdfR 0.85 IAI46_14010 threonylcarbamoyl-AMP synthase low > 86
Dickeya dadantii 3937 0.62 DDA3937_RS20190 HTH-type transcriptional regulator HdfR 0.83 DDA3937_RS10495 threonylcarbamoyl-AMP synthase low > 74
Rahnella sp. WP5 0.62 EX31_RS14970 HTH-type transcriptional regulator HdfR 0.81 EX31_RS09945 threonylcarbamoyl-AMP synthase low > 89
Dickeya dianthicola 67-19 0.62 HGI48_RS20335 HTH-type transcriptional regulator HdfR 0.83 HGI48_RS10495 threonylcarbamoyl-AMP synthase low > 71
Dickeya dianthicola ME23 0.62 DZA65_RS21375 HTH-type transcriptional regulator HdfR 0.83 DZA65_RS10975 threonylcarbamoyl-AMP synthase low > 75
Shewanella oneidensis MR-1 0.33 SO2202 transcriptional regulator, LysR family (NCBI ptt file) 0.66 SO3016 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_2403 LysR family transcriptional regulator (RefSeq) 0.66 Shewana3_1522 translation factor SUA5 (RefSeq) low > 73
Shewanella amazonensis SB2B 0.32 Sama_1997 LysR family transcriptional regulator (RefSeq) 0.70 Sama_2127 Sua5/YciO/YrdC/YwlC family protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_19195 LysR family transcriptional regulator 0.77 CSW01_05965 threonylcarbamoyl-AMP synthase low > 62
Shewanella loihica PV-4 0.26 Shew_2897 LysR family transcriptional regulator (RefSeq) 0.65 Shew_2249 Sua5/YciO/YrdC/YwlC family protein (RefSeq) low > 60
Variovorax sp. OAS795 0.20 ABID97_RS24430 LysR family transcriptional regulator 0.50 ABID97_RS22605 L-threonylcarbamoyladenylate synthase low > 91
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS19485 LysR family transcriptional regulator 0.60 PFLU_RS23910 threonylcarbamoyl-AMP synthase low > 109
Pseudomonas fluorescens SBW25 0.19 PFLU_RS19485 LysR family transcriptional regulator 0.60 PFLU_RS23910 threonylcarbamoyl-AMP synthase low > 109
Pseudomonas simiae WCS417 0.19 PS417_17700 LysR family transcriptional regulator 0.61 PS417_22270 hypothetical protein low > 88
Pseudomonas stutzeri RCH2 0.18 Psest_0802 Transcriptional regulator 0.63 Psest_1888 Sua5/YciO/YrdC/YwlC family protein low > 67
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_2837 HTH-type transcriptional regulator hdfR 0.59 PfGW456L13_4404 Hypothetical YciO protein, TsaC/YrdC paralog low > 87
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_22745 LysR family transcriptional regulator 0.58 AO353_18525 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_2079 HTH-type transcriptional regulator hdfR 0.59 Pf6N2E2_5626 Hypothetical YciO protein, TsaC/YrdC paralog low > 103
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_00585 LysR family transcriptional regulator 0.59 AO356_18500 hypothetical protein 0.25 98
Pseudomonas putida KT2440 0.16 PP_2350 LysR family transcriptional regulator 0.62 PP_4499 putative maturation enzyme low > 96
Pseudomonas sp. RS175 0.16 PFR28_01360 HTH-type transcriptional regulator HdfR 0.59 PFR28_03318 putative protein YciO low > 88

Not shown: 4 genomes with orthologs for BWI76_RS00940 only; 38 genomes with orthologs for BWI76_RS11870 only