| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS33580 | | geranyltranstransferase | 1.0 | BPHYT_RS18260 | | phenylacetic acid degradation protein | 0.41 | 14 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.96 | H281DRAFT_06016 | | farnesyl-diphosphate synthase | 0.92 | H281DRAFT_05856 | | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC | — | — |
| Paraburkholderia graminis OAS925 | 0.95 | ABIE53_004858 | | farnesyl diphosphate synthase | 0.93 | ABIE53_000005 | | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.86 | QEN71_RS15235 | | polyprenyl synthetase family protein | 0.88 | QEN71_RS28405 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaC | — | — |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS19130 | | geranyl transferase | 0.39 | HSERO_RS20620 | | phenylacetic acid degradation protein | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.57 | RR42_RS15010 | | geranyl transferase | 0.79 | RR42_RS23735 | | phenylacetyl-CoA 1,2-epoxidase, structural subunit (EC 1.14.13.149) (from data) | — | — |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS15640 | | polyprenyl synthetase family protein | 0.68 | ABZR87_RS21250 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaC | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS03710 | | (2E,6E)-farnesyl diphosphate synthase | 0.67 | RALBFv3_RS20650 | | phenylacetate-CoA oxygenase subunit PaaI | — | — |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS09960 | | (2E,6E)-farnesyl diphosphate synthase | 0.67 | UW163_RS18525 | | phenylacetate-CoA oxygenase subunit PaaI | — | — |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS13520 | | polyprenyl synthetase family protein | 0.64 | RPSI07_RS02140 | | phenylacetate-CoA oxygenase subunit PaaI | — | — |
| Ralstonia solanacearum GMI1000 | 0.52 | RS_RS11155 | | polyprenyl synthetase family protein | 0.60 | RS_RS20015 | | phenylacetate-CoA oxygenase subunit PaaI | — | — |
| Variovorax sp. SCN45 | 0.47 | GFF6129 | | (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) | 0.48 | GFF6095 | | 1,2-phenylacetyl-CoA epoxidase, subunit C (EC 1.14.13.149) | low | > 127 |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS09275 | | polyprenyl synthetase family protein | 0.48 | ABID97_RS22795 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaC | — | — |
| Marinobacter adhaerens HP15 | 0.44 | HP15_581 | | geranyltranstransferase | 0.39 | HP15_2699 | | phenylacetate-CoA oxygenase, PaaI subunit | — | — |
| Pseudomonas putida KT2440 | 0.43 | PP_0528 | | farnesyl diphosphate synthase | 0.32 | PP_3276 | | ring 1,2-phenylacetyl-CoA epoxidase beta subunit | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_1326 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) | 0.36 | PfGW456L13_2425 | | Phenylacetate-CoA oxygenase, PaaI subunit | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF5576 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | 0.55 | GFF1687 | | Phenylacetate-CoA oxygenase, PaaI subunit | — | — |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_01012 | | Farnesyl diphosphate synthase | 0.35 | MPMX20_02144 | | 1,2-phenylacetyl-CoA epoxidase, subunit C | — | — |
| Klebsiella michiganensis M5al | 0.40 | BWI76_RS06385 | | (2E,6E)-farnesyl diphosphate synthase | 0.33 | BWI76_RS13100 | | phenylacetate-CoA oxygenase subunit PaaI | — | — |
| Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_2550 | | Geranylgeranyl pyrophosphate synthase | 0.34 | EX28DRAFT_1418 | | phenylacetate-CoA oxygenase, PaaI subunit | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.38 | OHPLBJKB_03255 | | Farnesyl diphosphate synthase | 0.35 | OHPLBJKB_02321 | | 1,2-phenylacetyl-CoA epoxidase, subunit C | — | — |
| Escherichia coli ECRC62 | 0.38 | BNILDI_22780 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.36 | BNILDI_17935 | paaC | phenylacetate-CoA oxygenase subunit PaaC | — | — |
| Escherichia coli ECOR27 | 0.38 | NOLOHH_01365 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.36 | NOLOHH_19480 | paaC | phenylacetate-CoA oxygenase subunit PaaC | — | — |
| Escherichia coli BW25113 | 0.38 | b0421 | ispA | geranyltranstransferase (NCBI) | 0.35 | b1390 | paaC | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | — | — |
| Acinetobacter radioresistens SK82 | 0.37 | MPMX26_00661 | | Farnesyl diphosphate synthase | 0.36 | MPMX26_01558 | | 1,2-phenylacetyl-CoA epoxidase, subunit C | — | — |
| Serratia liquefaciens MT49 | 0.36 | IAI46_04930 | | (2E,6E)-farnesyl diphosphate synthase | 0.39 | IAI46_16360 | | phenylacetate-CoA oxygenase subunit PaaC | — | — |
| Azospirillum sp. SherDot2 | 0.36 | MPMX19_05065 | | Farnesyl diphosphate synthase | 0.43 | MPMX19_05772 | | 1,2-phenylacetyl-CoA epoxidase, subunit C | low | > 112 |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_002715 | | polyprenyl synthetase family protein | 0.41 | TX73_019500 | | phenylacetate-CoA oxygenase subunit PaaC | — | — |
| Sinorhizobium meliloti 1021 | 0.30 | SMc03884 | | geranyltranstransferase | 0.37 | SM_b21638 | | phenylacetic acid degradation protein | — | — |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_3295 | | Polyprenyl synthetase (RefSeq) | 0.40 | Dshi_3820 | | phenylacetate-CoA oxygenase, PaaI subunit (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c34160 | | geranyltranstransferase IspA | 0.37 | PGA1_c04060 | | phenylacetic acid degradation protein PaaC | — | — |
Not shown: 61 genomes with orthologs for BPHYT_RS33580 only; 1 genomes with orthologs for BPHYT_RS18260 only