Conservation of cofitness between BPHYT_RS30235 and BPHYT_RS12025 in Burkholderia phytofirmans PsJN

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS30235 tartrate dehydrogenase 1.0 BPHYT_RS12025 multidrug DMT transporter permease 0.25 6
Paraburkholderia graminis OAS925 0.98 ABIE53_005023 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase 0.82 ABIE53_002479 drug/metabolite transporter (DMT)-like permease low > 113
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase 0.84 H281DRAFT_00633 Permease of the drug/metabolite transporter (DMT) superfamily low > 103
Paraburkholderia sabiae LMG 24235 0.88 QEN71_RS32005 tartrate dehydrogenase 0.79 QEN71_RS06535 DMT family transporter low > 153
Ralstonia solanacearum PSI07 0.80 RPSI07_RS07555 tartrate dehydrogenase 0.53 RPSI07_RS16980 EamA/RhaT family transporter low > 81
Ralstonia solanacearum GMI1000 0.79 RS_RS24845 tartrate dehydrogenase 0.48 RS_RS07165 EamA/RhaT family transporter low > 80
Ralstonia solanacearum UW163 0.78 UW163_RS16880 tartrate dehydrogenase 0.50 UW163_RS13840 EamA/RhaT family transporter — —
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS16145 tartrate dehydrogenase 0.50 RALBFv3_RS00510 EamA/RhaT family transporter low > 76
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS21505 tartrate dehydrogenase 0.53 ABZR87_RS11960 DMT family transporter low > 80
Serratia liquefaciens MT49 0.76 IAI46_21025 tartrate dehydrogenase 0.23 IAI46_13035 DMT family transporter low > 86
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS07390 tartrate dehydrogenase 0.35 HSERO_RS06235 multidrug DMT transporter permease low > 78
Klebsiella michiganensis M5al 0.74 BWI76_RS10680 tartrate dehydrogenase 0.25 BWI76_RS02710 EamA family transporter low > 92
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_2396 Tartrate dehydrogenase 0.33 Psyr_0911 Protein of unknown function DUF6 low > 86
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_2396 Tartrate dehydrogenase 0.33 Psyr_0911 Protein of unknown function DUF6 low > 86
Escherichia coli ECOR38 0.73 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.23 HEPCGN_10255 ytfF Inner membrane protein YtfF low > 87
Escherichia coli ECOR27 0.73 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.23 NOLOHH_04320 ytfF Inner membrane protein YtfF low > 75
Escherichia coli ECRC100 0.72 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.23 OKFHMN_12060 ytfF Inner membrane protein YtfF low > 80
Escherichia coli BW25113 0.72 b1800 yeaU predicted dehydrogenase (NCBI) 0.23 b4210 ytfF predicted inner membrane protein (RefSeq) low > 76
Pseudomonas fluorescens SBW25 0.72 PFLU_RS19735 tartrate dehydrogenase 0.14 PFLU_RS16760 DMT family transporter low > 109
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] 0.23 OHPLBJKB_03823 Inner membrane protein YtfF low > 73
Escherichia coli ECRC102 0.72 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.23 NIAGMN_09910 ytfF Inner membrane protein YtfF — —
Escherichia coli ECRC62 0.72 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.23 BNILDI_07200 ytfF Inner membrane protein YtfF low > 75
Escherichia coli ECRC98 0.72 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.23 JDDGAC_15700 ytfF Inner membrane protein YtfF low > 86
Escherichia coli ECRC99 0.72 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.23 KEDOAH_16095 ytfF Inner membrane protein YtfF — —
Escherichia coli ECRC101 0.72 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.23 MCAODC_02575 ytfF Inner membrane protein YtfF low > 87
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS19735 tartrate dehydrogenase 0.14 PFLU_RS16760 DMT family transporter low > 109
Escherichia coli BL21 0.72 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 0.23 ECD_04082 DMT transporter family inner membrane protein low > 61
Variovorax sp. SCN45 0.66 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.19 GFF6462 Integral membrane protein low > 127
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS02600 tartrate dehydrogenase 0.52 RR42_RS11755 multidrug DMT transporter permease low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF3852 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.34 GFF2932 putative membrane protein low > 90
Dickeya dadantii 3937 0.66 DDA3937_RS04645 tartrate dehydrogenase 0.35 DDA3937_RS08695 DMT family transporter low > 74
Pantoea sp. MT58 0.65 IAI47_17525 tartrate dehydrogenase 0.26 IAI47_17795 DMT family transporter low > 76
Lysobacter sp. OAE881 0.31 ABIE51_RS14200 isocitrate dehydrogenase 0.29 ABIE51_RS00565 DMT family transporter — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) 0.34 Xcc-8004.4238.1 putative membrane protein — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS00740 isocitrate dehydrogenase 0.27 ABZR86_RS22180 DMT family transporter — —

Not shown: 26 genomes with orthologs for BPHYT_RS30235 only; 12 genomes with orthologs for BPHYT_RS12025 only