Conservation of cofitness between BPHYT_RS13975 and BPHYT_RS04960 in Burkholderia phytofirmans PsJN

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13975 LysR family transcriptional regulator 1.0 BPHYT_RS04960 membrane protein 0.23 14
Paraburkholderia bryophila 376MFSha3.1 0.85 H281DRAFT_04446 transcriptional regulator, LysR family 0.78 H281DRAFT_00156 Outer membrane protein OmpA low > 103
Paraburkholderia graminis OAS925 0.82 ABIE53_002962 DNA-binding transcriptional LysR family regulator 0.80 ABIE53_001266 outer membrane protein OmpA-like peptidoglycan-associated protein low > 113
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS04990 LysR family transcriptional regulator 0.67 QEN71_RS25020 OmpA family protein low > 153
Ralstonia solanacearum GMI1000 0.48 RS_RS04040 LysR family transcriptional regulator 0.48 RS_RS11950 OmpA family lipoprotein low > 80
Ralstonia solanacearum PSI07 0.48 RPSI07_RS19975 LysR family transcriptional regulator 0.48 RPSI07_RS12970 OmpA family protein low > 81
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS09325 LysR family transcriptional regulator 0.48 ABZR87_RS16255 OmpA family protein low > 80
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS15135 LysR family transcriptional regulator 0.56 RR42_RS16015 membrane protein low > 128
Ralstonia solanacearum UW163 0.46 UW163_RS00325 LysR family transcriptional regulator 0.49 UW163_RS09270 OmpA family protein — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS13245 LysR family transcriptional regulator 0.49 RALBFv3_RS04400 OmpA family protein low > 76
Pantoea sp. MT58 0.42 IAI47_06710 LysR family transcriptional regulator 0.27 IAI47_00140 OmpA family lipoprotein low > 76
Escherichia coli ECRC62 0.39 BNILDI_17235 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.25 BNILDI_03575 yiaD OmpA family lipoprotein low > 75
Escherichia fergusonii Becca 0.39 EFB2_02434 HTH-type transcriptional regulator GltR 0.25 EFB2_00255 putative lipoprotein YiaD low > 86
Escherichia coli Nissle 1917 0.39 ECOLIN_RS08715 LysR family transcriptional regulator 0.25 ECOLIN_RS20325 OmpA family lipoprotein — —
Escherichia coli ECOR27 0.38 NOLOHH_18755 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.25 NOLOHH_07970 yiaD OmpA family lipoprotein low > 75
Escherichia coli ECRC101 0.38 MCAODC_16820 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.25 MCAODC_06540 yiaD OmpA family lipoprotein low > 87
Escherichia coli ECRC100 0.38 OKFHMN_01105 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.25 OKFHMN_16025 yiaD OmpA family lipoprotein — —
Escherichia coli ECRC102 0.38 NIAGMN_25250 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.25 NIAGMN_13785 yiaD OmpA family lipoprotein — —
Escherichia coli ECRC98 0.38 JDDGAC_03615 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.25 JDDGAC_19655 yiaD OmpA family lipoprotein — —
Escherichia coli ECRC99 0.38 KEDOAH_27325 yneJ Uncharacterized HTH-type transcriptional regulator YneJ 0.25 KEDOAH_12125 yiaD OmpA family lipoprotein — —
Escherichia coli BW25113 0.38 b1526 yneJ predicted DNA-binding transcriptional regulator (NCBI) 0.25 b3552 yiaD predicted outer membrane lipoprotien (NCBI) low > 76
Escherichia coli BL21 0.38 ECD_01483 putative DNA-binding transcriptional regulator 0.27 ECD_03402 multicopy suppressor of bamB; outer membrane lipoprotein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_02193 HTH-type transcriptional regulator GltR 0.25 OHPLBJKB_00154 putative lipoprotein YiaD low > 73
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_2660 Transcriptional regulators, LysR family 0.23 Pf6N2E2_5327 Outer membrane protein assembly factor YaeT precursor low > 103
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_04115 LysR family transcriptional regulator 0.23 AO356_17015 cell envelope biogenesis protein OmpA low > 104
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_18385 LysR family transcriptional regulator 0.25 AO353_15165 cell envelope biogenesis protein OmpA low > 101
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_532 Transcriptional regulators, LysR family 0.24 Pf1N1B4_2964 Outer membrane protein assembly factor YaeT precursor low > 87
Pseudomonas sp. RS175 0.37 PFR28_00773 HTH-type transcriptional regulator GltR 0.25 PFR28_00255 putative lipoprotein YiaD low > 88
Enterobacter sp. TBS_079 0.37 MPMX20_02268 HTH-type transcriptional regulator GltR 0.24 MPMX20_00182 putative lipoprotein YiaD low > 85
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_3879 LysR family transcriptional regulator YneJ 0.24 PfGW456L13_1624 Outer membrane protein assembly factor YaeT precursor low > 87
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1199 Transcriptional regulator 0.23 EX28DRAFT_3812 Outer membrane protein and related peptidoglycan-associated (lipo)proteins low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF2510 LysR family transcriptional regulator YneJ 0.24 GFF459 Outer membrane protein A precursor low > 78
Klebsiella michiganensis M5al 0.36 BWI76_RS15210 LysR family transcriptional regulator 0.25 BWI76_RS26935 OmpA family lipoprotein low > 92

Not shown: 22 genomes with orthologs for BPHYT_RS13975 only; 10 genomes with orthologs for BPHYT_RS04960 only