Conservation of cofitness between BNILDI_05055 and BNILDI_19160 in Escherichia coli ECRC62

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_05055 pldB lysophospholipase L2 1.0 BNILDI_19160 mfd transcription-repair coupling factor 0.88 6
Escherichia fergusonii Becca 1.00 EFB2_04812 Lysophospholipase L2 1.00 EFB2_02861 Transcription-repair-coupling factor low > 86
Escherichia coli BW25113 1.00 b3825 pldB lysophospholipase L(2) (NCBI) 0.98 b1114 mfd transcription-repair coupling factor (NCBI) low > 76
Escherichia coli BL21 1.00 ECD_03704 lysophospholipase L2 0.98 ECD_01110 transcription-repair coupling factor low > 61
Escherichia coli ECOR27 1.00 NOLOHH_06475 pldB lysophospholipase L2 1.00 NOLOHH_20995 mfd transcription-repair coupling factor low > 75
Escherichia coli ECRC101 1.00 MCAODC_04850 pldB lysophospholipase L2 1.00 MCAODC_22830 mfd transcription-repair coupling factor low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04226 Lysophospholipase L2 1.00 OHPLBJKB_02552 Transcription-repair-coupling factor low > 73
Escherichia coli ECRC98 1.00 JDDGAC_17970 pldB lysophospholipase L2 1.00 JDDGAC_07130 mfd transcription-repair coupling factor 0.91 4
Escherichia coli ECRC99 1.00 KEDOAH_13805 pldB lysophospholipase L2 1.00 KEDOAH_24285 mfd transcription-repair coupling factor — —
Escherichia coli ECRC100 1.00 OKFHMN_14345 pldB lysophospholipase L2 1.00 OKFHMN_03470 mfd transcription-repair coupling factor low > 80
Escherichia coli ECRC102 1.00 NIAGMN_12100 pldB lysophospholipase L2 1.00 NIAGMN_24360 mfd transcription-repair coupling factor — —
Escherichia coli ECOR38 1.00 HEPCGN_13045 pldB lysophospholipase L2 1.00 HEPCGN_24015 mfd transcription-repair coupling factor low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF251 Lysophospholipase L2 (EC 3.1.1.5) 0.95 GFF3397 Transcription-repair coupling factor low > 78
Enterobacter sp. TBS_079 0.83 MPMX20_04455 Lysophospholipase L2 0.91 MPMX20_01795 Transcription-repair-coupling factor low > 85
Enterobacter asburiae PDN3 0.82 EX28DRAFT_4490 Lysophospholipase 0.91 EX28DRAFT_1816 transcription-repair coupling factor (mfd) low > 76
Klebsiella michiganensis M5al 0.80 BWI76_RS01260 lysophospholipase L2 0.92 BWI76_RS11205 transcription-repair coupling factor low > 92
Serratia liquefaciens MT49 0.63 IAI46_00785 lysophospholipase L2 0.81 IAI46_10320 transcription-repair coupling factor low > 86
Pantoea sp. MT58 0.62 IAI47_18340 lysophospholipase L2 0.82 IAI47_11975 transcription-repair coupling factor low > 76
Rahnella sp. WP5 0.61 EX31_RS15225 lysophospholipase L2 0.81 EX31_RS24520 transcription-repair coupling factor low > 89
Erwinia tracheiphila SCR3 0.59 LU632_RS24080 pldB lysophospholipase L2 0.83 LU632_RS14730 mfd transcription-repair coupling factor low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS21030 lysophospholipase L2 0.80 DZA65_RS13530 transcription-repair coupling factor low > 75
Dickeya dadantii 3937 0.58 DDA3937_RS19830 lysophospholipase L2 0.81 DDA3937_RS13000 transcription-repair coupling factor low > 74
Dickeya dianthicola 67-19 0.57 HGI48_RS19985 lysophospholipase L2 0.80 HGI48_RS13065 transcription-repair coupling factor low > 71
Pectobacterium carotovorum WPP14 0.56 HER17_RS01410 lysophospholipase L2 0.83 HER17_RS08775 transcription-repair coupling factor low > 75
Shewanella loihica PV-4 0.32 Shew_3723 alpha/beta hydrolase fold (RefSeq) 0.55 Shew_1630 transcription-repair coupling factor (RefSeq) low > 60
Shewanella sp. ANA-3 0.31 Shewana3_4119 alpha/beta hydrolase fold (RefSeq) 0.55 Shewana3_2289 transcription-repair coupling factor (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_00685 lysophospholipase 0.64 CSW01_09445 transcription-repair coupling factor low > 62
Shewanella oneidensis MR-1 0.30 SO4733 lypA lysophospholipase L2 (NCBI ptt file) 0.55 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.27 Sama_0083 alpha/beta hydrolase fold (RefSeq) 0.54 Sama_1330 transcription-repair coupling factor (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.27 MIT1002_00479 lysophospholipase L2 0.57 MIT1002_01646 Transcription-repair-coupling factor low > 70
Dinoroseobacter shibae DFL-12 0.16 Dshi_0780 alpha/beta hydrolase fold (RefSeq) 0.31 Dshi_1561 transcription-repair coupling factor (RefSeq) low > 64
Agrobacterium fabrum C58 0.16 Atu3886 lysophospholipase 0.31 Atu1778 transcription-repair coupling factor low > 89
Rhizobium sp. OAE497 0.15 ABIE40_RS16315 alpha/beta hydrolase 0.31 ABIE40_RS09310 transcription-repair coupling factor low > 107
Sinorhizobium meliloti 1021 0.15 SMc04041 lysophospholipase L2 protein 0.32 SMc04450 transcription-repair coupling factor — —
Caulobacter crescentus NA1000 0.15 CCNA_02336 lysophospholipase L2 0.32 CCNA_01920 transcription-repair coupling factor Mfd low > 66
Caulobacter crescentus NA1000 Δfur 0.15 CCNA_02336 lysophospholipase L2 0.32 CCNA_01920 transcription-repair coupling factor Mfd low > 67
Rhodopseudomonas palustris CGA009 0.15 TX73_004575 alpha/beta hydrolase 0.33 TX73_013805 transcription-repair coupling factor — —
Phaeobacter inhibens DSM 17395 0.15 PGA1_c07480 Lysophospholipase 0.31 PGA1_c14920 transcription-repair-coupling factor Mfd low > 62
Azospirillum sp. SherDot2 0.15 MPMX19_00440 Lysophospholipase L2 0.32 MPMX19_00876 Transcription-repair-coupling factor low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.14 A4249_RS12480 alpha/beta hydrolase 0.32 A4249_RS04775 transcription-repair coupling factor low > 48
Sphingomonas koreensis DSMZ 15582 0.10 Ga0059261_3246 Lysophospholipase 0.32 Ga0059261_0960 transcription-repair coupling factor (mfd) low > 68

Not shown: 1 genomes with orthologs for BNILDI_05055 only; 47 genomes with orthologs for BNILDI_19160 only