Conservation of cofitness between BNILDI_05055 and BNILDI_11730 in Escherichia coli ECRC62

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_05055 pldB lysophospholipase L2 1.0 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.87 9
Escherichia coli BL21 1.00 ECD_03704 lysophospholipase L2 1.00 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase low > 61
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21960 lysophospholipase L2 1.00 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia fergusonii Becca 1.00 EFB2_04812 Lysophospholipase L2 1.00 EFB2_01296 Ribosomal large subunit pseudouridine synthase D low > 86
Escherichia coli BW25113 1.00 b3825 pldB lysophospholipase L(2) (NCBI) 1.00 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) — —
Escherichia coli ECOR27 1.00 NOLOHH_06475 pldB lysophospholipase L2 1.00 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75
Escherichia coli ECRC102 1.00 NIAGMN_12100 pldB lysophospholipase L2 0.99 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli ECRC99 1.00 KEDOAH_13805 pldB lysophospholipase L2 0.99 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli ECRC101 1.00 MCAODC_04850 pldB lysophospholipase L2 0.99 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 87
Escherichia coli ECRC98 1.00 JDDGAC_17970 pldB lysophospholipase L2 0.99 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04226 Lysophospholipase L2 1.00 OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D low > 73
Escherichia coli ECRC100 1.00 OKFHMN_14345 pldB lysophospholipase L2 0.99 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 80
Escherichia coli ECOR38 1.00 HEPCGN_13045 pldB lysophospholipase L2 0.99 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF251 Lysophospholipase L2 (EC 3.1.1.5) 0.94 GFF4182 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) low > 78
Enterobacter sp. TBS_079 0.83 MPMX20_04455 Lysophospholipase L2 0.94 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D low > 85
Enterobacter asburiae PDN3 0.82 EX28DRAFT_4490 Lysophospholipase 0.94 EX28DRAFT_2695 pseudouridine synthase, RluA family low > 76
Klebsiella michiganensis M5al 0.80 BWI76_RS01260 lysophospholipase L2 0.93 BWI76_RS21450 23S rRNA pseudouridine(1911/1915/1917) synthase low > 92
Serratia liquefaciens MT49 0.63 IAI46_00785 lysophospholipase L2 0.88 IAI46_03985 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 86
Pantoea sp. MT58 0.62 IAI47_18340 lysophospholipase L2 0.87 IAI47_04425 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 76
Rahnella sp. WP5 0.61 EX31_RS15225 lysophospholipase L2 0.84 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 89
Erwinia tracheiphila SCR3 0.59 LU632_RS24080 pldB lysophospholipase L2 0.85 LU632_RS16945 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 74
Dickeya dadantii 3937 0.58 DDA3937_RS19830 lysophospholipase L2 0.87 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS21030 lysophospholipase L2 0.85 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS19985 lysophospholipase L2 0.85 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 71
Pectobacterium carotovorum WPP14 0.56 HER17_RS01410 lysophospholipase L2 0.85 HER17_RS05400 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75
Shewanella loihica PV-4 0.32 Shew_3723 alpha/beta hydrolase fold (RefSeq) 0.64 Shew_2950 RluA family pseudouridine synthase (RefSeq) low > 60
Shewanella sp. ANA-3 0.31 Shewana3_4119 alpha/beta hydrolase fold (RefSeq) 0.66 Shewana3_3171 ribosomal large subunit pseudouridine synthase D (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_00685 lysophospholipase 0.70 CSW01_03695 ribosomal large subunit pseudouridine synthase D 0.75 48
Shewanella amazonensis SB2B 0.27 Sama_0083 alpha/beta hydrolase fold (RefSeq) 0.62 Sama_2605 pseudouridylate synthase (RefSeq) — —
Alteromonas macleodii MIT1002 0.27 MIT1002_00479 lysophospholipase L2 0.63 MIT1002_02679 Ribosomal large subunit pseudouridine synthase D low > 70
Dinoroseobacter shibae DFL-12 0.16 Dshi_0780 alpha/beta hydrolase fold (RefSeq) 0.27 Dshi_2610 pseudouridine synthase, RluA family (RefSeq) low > 64
Agrobacterium fabrum C58 0.16 Atu3886 lysophospholipase 0.32 Atu2443 ribosomal large subunit pseudouridine synthase, RluD subfamily — —
Rhizobium sp. OAE497 0.15 ABIE40_RS16315 alpha/beta hydrolase 0.33 ABIE40_RS14790 RluA family pseudouridine synthase 0.38 69
Sinorhizobium meliloti 1021 0.15 SMc04041 lysophospholipase L2 protein 0.31 SMc00647 ribosomal large subunit pseudouridine synthase — —
Rhodopseudomonas palustris CGA009 0.15 TX73_004575 alpha/beta hydrolase 0.34 TX73_001905 RluA family pseudouridine synthase — —
Caulobacter crescentus NA1000 0.15 CCNA_02336 lysophospholipase L2 0.30 CCNA_00485 ribosomal large subunit pseudouridine synthase D low > 66
Caulobacter crescentus NA1000 Δfur 0.15 CCNA_02336 lysophospholipase L2 0.30 CCNA_00485 ribosomal large subunit pseudouridine synthase D low > 67
Phaeobacter inhibens DSM 17395 0.15 PGA1_c07480 Lysophospholipase 0.33 PGA1_c09000 ribosomal large subunit pseudouridine synthase D low > 62
Azospirillum sp. SherDot2 0.15 MPMX19_00440 Lysophospholipase L2 0.33 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.14 A4249_RS12480 alpha/beta hydrolase 0.26 A4249_RS10060 RluA family pseudouridine synthase low > 48
Sphingomonas koreensis DSMZ 15582 0.10 Ga0059261_3246 Lysophospholipase 0.35 Ga0059261_0664 pseudouridine synthase, RluA family low > 68

Not shown: 1 genomes with orthologs for BNILDI_05055 only; 53 genomes with orthologs for BNILDI_11730 only