Conservation of cofitness between BBR_RS14475 and BBR_RS14480 in Bifidobacterium breve UCC2003

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bifidobacterium breve UCC2003 1.0 BBR_RS14475 formate C-acetyltransferase 1.0 BBR_RS14480 pyruvate formate-lyase 1-activating enzyme 0.79 2
Rhodospirillum rubrum S1H 0.52 Rru_A3000 Formate acetyltransferase (NCBI) 0.35 Rru_A2999 Radical SAM (NCBI) 0.78 3
Serratia liquefaciens MT49 0.52 IAI46_08610 formate C-acetyltransferase 0.29 IAI46_08605 pyruvate formate lyase 1-activating protein 0.96 1
Azospirillum sp. SherDot2 0.51 MPMX19_04845 Formate acetyltransferase 0.33 MPMX19_04846 Pyruvate formate-lyase 1-activating enzyme low > 112
Fusobacterium nucleatum SB010 0.51 HUW76_08085 formate C-acetyltransferase 0.30 HUW76_08090 pyruvate formate lyase-activating protein low > 35
Dickeya dadantii 3937 0.51 DDA3937_RS09655 formate C-acetyltransferase 0.30 DDA3937_RS09650 pyruvate formate lyase 1-activating protein 0.94 2
Pantoea sp. MT58 0.51 IAI47_12880 formate C-acetyltransferase 0.30 IAI47_12885 pyruvate formate lyase 1-activating protein 0.95 2
Rahnella sp. WP5 0.51 EX31_RS18270 formate C-acetyltransferase 0.29 EX31_RS18470 pyruvate formate lyase 1-activating protein 0.63 7
Dickeya dianthicola 67-19 0.51 HGI48_RS09665 formate C-acetyltransferase 0.29 HGI48_RS09660 pyruvate formate lyase 1-activating protein 0.72 29
Pectobacterium carotovorum WPP14 0.51 HER17_RS12305 formate C-acetyltransferase 0.30 HER17_RS12310 pyruvate formate lyase 1-activating protein 0.98 1
Dickeya dianthicola ME23 0.51 DZA65_RS09975 formate C-acetyltransferase 0.29 DZA65_RS09970 pyruvate formate lyase 1-activating protein 0.78 3
Klebsiella michiganensis M5al 0.50 BWI76_RS09735 formate acetyltransferase 0.30 BWI76_RS09730 pyruvate formate lyase 1-activating protein 0.32 68
Erwinia tracheiphila SCR3 0.50 LU632_RS09775 pflB formate C-acetyltransferase 0.29 LU632_RS09770 pflA pyruvate formate lyase 1-activating protein low > 74
Enterobacter asburiae PDN3 0.50 EX28DRAFT_2032 formate acetyltransferase 1 0.30 EX28DRAFT_2033 pyruvate formate-lyase 1-activating enzyme low > 76
Enterobacter sp. TBS_079 0.50 MPMX20_01562 Formate acetyltransferase 1 0.30 MPMX20_01561 Pyruvate formate-lyase 1-activating enzyme 0.83 1
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_02765 Formate acetyltransferase 1 0.31 OHPLBJKB_02766 Pyruvate formate-lyase 1-activating enzyme low > 73
Escherichia coli ECOR27 0.50 NOLOHH_22070 pflB formate C-acetyltransferase 0.31 NOLOHH_22075 pflA pyruvate formate lyase 1-activating protein low > 75
Escherichia coli BL21 0.50 ECD_00907 formate C-acetyltransferase 1, anaerobic; pyruvate formate-lyase 1 0.31 ECD_00906 pyruvate formate-lyase 1-activating enzyme; [formate-C-acetyltransferase 1]-activating enzyme; PFL activase — —
Escherichia coli ECRC62 0.50 BNILDI_20325 pflB formate C-acetyltransferase 0.31 BNILDI_20330 pflA pyruvate formate lyase 1-activating protein low > 75
Escherichia fergusonii Becca 0.50 EFB2_03161 Formate acetyltransferase 1 0.31 EFB2_03162 Pyruvate formate-lyase 1-activating enzyme 0.63 23
Escherichia coli BW25113 0.50 b0903 pflB pyruvate formate lyase I (NCBI) 0.31 b0902 pflA pyruvate formate lyase activating enzyme 1 (NCBI) 0.96 1
Escherichia coli ECRC101 0.50 MCAODC_24900 pflB formate C-acetyltransferase 0.31 MCAODC_24905 pflA pyruvate formate lyase 1-activating protein low > 87
Escherichia coli ECRC99 0.50 KEDOAH_22225 pflB formate C-acetyltransferase 0.31 KEDOAH_22220 pflA pyruvate formate lyase 1-activating protein — —
Escherichia coli ECRC102 0.50 NIAGMN_03230 pflB formate C-acetyltransferase 0.31 NIAGMN_03235 pflA pyruvate formate lyase 1-activating protein — —
Escherichia coli ECRC100 0.50 OKFHMN_05510 pflB formate C-acetyltransferase 0.31 OKFHMN_05515 pflA pyruvate formate lyase 1-activating protein low > 80
Escherichia coli ECOR38 0.50 HEPCGN_23010 pflB formate C-acetyltransferase 0.31 HEPCGN_23005 pflA pyruvate formate lyase 1-activating protein low > 87
Escherichia coli ECRC98 0.50 JDDGAC_09120 pflB formate C-acetyltransferase 0.31 JDDGAC_09325 pflA pyruvate formate lyase 1-activating protein low > 86
Azospirillum brasilense Sp245 0.50 AZOBR_RS30195 formate acetyltransferase 0.36 AZOBR_RS30150 pyruvate formate lyase-activating protein low > 97
Shewanella sp. ANA-3 0.49 Shewana3_1555 formate acetyltransferase (RefSeq) 0.31 Shewana3_1554 pflA pyruvate formate lyase-activating enzyme 1 (RefSeq) low > 73
Shewanella amazonensis SB2B 0.49 Sama_1498 formate C-acetyltransferase (RefSeq) 0.31 Sama_1497 pflA pyruvate formate lyase-activating enzyme 1 (RefSeq) 0.47 10
Shewanella oneidensis MR-1 0.49 SO2912 pflB formate acetyltransferase (NCBI ptt file) 0.31 SO2913 pflA pyruvate formate-lyase 1 activating enzyme (NCBI ptt file) 0.91 2
Parabacteroides merdae CL09T00C40 0.49 HMPREF1078_RS04220 formate C-acetyltransferase 0.30 HMPREF1078_RS04215 pyruvate formate-lyase-activating protein low > 61
Shewanella loihica PV-4 0.49 Shew_2390 formate acetyltransferase (RefSeq) 0.31 Shew_2391 pflA pyruvate formate lyase-activating enzyme 1 (RefSeq) 0.70 3
Escherichia coli Nissle 1917 0.48 ECOLIN_RS17925 2-ketobutyrate formate-lyase/pyruvate formate-lyase 0.31 ECOLIN_RS04780 pyruvate formate lyase 1-activating protein — —
Bacteroides thetaiotaomicron VPI-5482 0.46 BT4738 formate acetyltransferase (NCBI ptt file) 0.24 BT4737 pyruvate formate-lyase activating enzyme (NCBI ptt file) 0.68 1
Phocaeicola dorei CL03T12C01 0.46 ABI39_RS14450 formate C-acetyltransferase 0.23 ABI39_RS14445 pyruvate formate lyase-activating protein 0.30 61
Phocaeicola vulgatus CL09T03C04 0.46 HMPREF1058_RS18120 formate C-acetyltransferase 0.23 HMPREF1058_RS18115 pyruvate formate lyase-activating protein 0.64 1
Bacteroides stercoris CC31F 0.45 HMPREF1181_RS12340 formate C-acetyltransferase 0.24 HMPREF1181_RS12345 pyruvate formate lyase-activating protein 0.91 1

Not shown: 3 genomes with orthologs for BBR_RS14475 only; 0 genomes with orthologs for BBR_RS14480 only