Conservation of cofitness between Atu3137 and Atu3140 in Agrobacterium fabrum C58

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3137 C4-dicarboxylate-binding protein 1.0 Atu3140 5-dehydro-4-deoxyglucarate dehydratase 0.59 5
Bosea sp. OAE506 0.65 ABIE41_RS07830 TRAP transporter substrate-binding protein 0.52 ABIE41_RS20665 5-dehydro-4-deoxyglucarate dehydratase low > 77
Azospirillum sp. SherDot2 0.59 MPMX19_05801 Solute-binding protein 0.51 MPMX19_02894 putative 5-dehydro-4-deoxyglucarate dehydratase low > 112
Sinorhizobium meliloti 1021 0.58 SM_b21353 periplasmic C4-dicarboxylate transport protein 0.65 SMa1440 5-dehydro-4-deoxyglucarate dehydratase low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF797 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.50 GFF792 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 90
Variovorax sp. OAS795 0.50 ABID97_RS10340 TRAP transporter substrate-binding protein 0.52 ABID97_RS10365 5-dehydro-4-deoxyglucarate dehydratase 0.46 7
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS24175 C4-dicarboxylate ABC transporter 0.53 BPHYT_RS20415 5-dehydro-4-deoxyglucarate dehydratase low > 109
Paraburkholderia graminis OAS925 0.47 ABIE53_006502 tripartite ATP-independent transporter DctP family solute receptor 0.53 ABIE53_004431 5-dehydro-4-deoxyglucarate dehydratase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_05324 tripartite ATP-independent transporter solute receptor, DctP family 0.54 H281DRAFT_03816 5-dehydro-4-deoxyglucarate dehydratase low > 103
Variovorax sp. SCN45 0.47 GFF2918 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.52 GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 127
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS21090 TRAP transporter substrate-binding protein 0.50 ABZR87_RS20340 5-dehydro-4-deoxyglucarate dehydratase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.201.1 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.47 Xcc-8004.1211.1 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 74
Acidovorax sp. GW101-3H11 0.39 Ac3H11_3957 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.52 Ac3H11_336 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 79
Pseudomonas sp. DMC3 0.38 GFF1616 Solute-binding protein 0.51 GFF1798 putative 5-dehydro-4-deoxyglucarate dehydratase low > 89
Pseudomonas orientalis W4I3 0.38 QF045_RS19030 TRAP transporter substrate-binding protein 0.50 QF045_RS07190 5-dehydro-4-deoxyglucarate dehydratase low > 93
Pseudomonas stutzeri RCH2 0.38 Psest_0363 tripartite ATP-independent periplasmic transporter solute receptor, DctP family 0.51 Psest_0374 5-dehydro-4-deoxyglucarate dehydratase low > 67
Pseudomonas putida KT2440 0.38 PP_1169 D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) 0.51 PP_3599 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) 0.66 6
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS19295 TRAP transporter substrate-binding protein 0.53 PFLU_RS11220 5-dehydro-4-deoxyglucarate dehydratase low > 109
Pseudomonas sp. BP01 0.37 JOY50_RS02035 TRAP transporter substrate-binding protein 0.51 JOY50_RS07415 kdgD 5-dehydro-4-deoxyglucarate dehydratase — —
Pseudomonas segetis P6 0.37 MPMX49_04070 Solute-binding protein 0.53 MPMX49_04067 putative 5-dehydro-4-deoxyglucarate dehydratase — —
Pseudomonas fluorescens SBW25 0.37 PFLU_RS19295 TRAP transporter substrate-binding protein 0.53 PFLU_RS11220 5-dehydro-4-deoxyglucarate dehydratase 0.40 32
Pseudomonas sp. RS175 0.37 PFR28_02438 Solute-binding protein 0.51 PFR28_00142 putative 5-dehydro-4-deoxyglucarate dehydratase 0.95 1
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_23055 C4-dicarboxylate ABC transporter 0.51 AO356_07185 5-dehydro-4-deoxyglucarate dehydratase low > 104
Pseudomonas simiae WCS417 0.37 PS417_17370 C4-dicarboxylate ABC transporter 0.50 PS417_04195 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) low > 88
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_487 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.50 Pf6N2E2_3299 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) low > 103
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_03768 Solute-binding protein 0.52 GEMAOFIL_02430 putative 5-dehydro-4-deoxyglucarate dehydratase low > 96
Rahnella sp. WP5 0.36 EX31_RS08010 TRAP transporter substrate-binding protein 0.13 EX31_RS17515 dihydrodipicolinate synthase family protein low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0900 TRAP dicarboxylate transporter- DctP subunit 0.50 Psyr_4227 Dihydrodipicolinate synthetase low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0900 TRAP dicarboxylate transporter- DctP subunit 0.50 Psyr_4227 Dihydrodipicolinate synthetase low > 86
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS04240 C4-dicarboxylate ABC transporter 0.50 HSERO_RS15785 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) low > 78

Not shown: 23 genomes with orthologs for Atu3137 only; 11 genomes with orthologs for Atu3140 only