Conservation of cofitness between Atu1140 and Atu2718 in Agrobacterium fabrum C58

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase 1.0 Atu2718 homoserine O-succinyltransferase 0.90 12
Rhizobium sp. OAE497 0.66 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase 0.86 ABIE40_RS18590 homoserine O-succinyltransferase 0.81 31
Sinorhizobium meliloti 1021 0.65 SMc00614 phosphoribosylglycinamide formyltransferase 0.85 SMc03797 homoserine O-succinyltransferase 0.95 14
Azospirillum brasilense Sp245 0.47 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase 0.60 AZOBR_RS14010 homoserine O-succinyltransferase low > 97
Rahnella sp. WP5 0.44 EX31_RS22690 phosphoribosylglycinamide formyltransferase 0.44 EX31_RS11735 homoserine O-succinyltransferase low > 89
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS03040 phosphoribosylglycinamide formyltransferase 0.54 QEN71_RS42530 homoserine O-succinyltransferase low > 153
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_11355 phosphoribosylglycinamide formyltransferase 0.43 CSW01_08100 homoserine O-succinyltransferase low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.43 GFF1350 Homoserine O-succinyltransferase (EC 2.3.1.46) low > 78
Escherichia coli Nissle 1917 0.40 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase 0.44 ECOLIN_RS25515 homoserine O-succinyltransferase — —
Escherichia coli ECOR38 0.40 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase 0.44 HEPCGN_11915 metA homoserine O-succinyltransferase low > 85
Escherichia coli BL21 0.40 ECD_02392 phosphoribosylglycinamide formyltransferase 1 0.44 ECD_03885 homoserine O-transsuccinylase low > 60
Escherichia coli ECRC99 0.40 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase 0.44 KEDOAH_14885 metA homoserine O-succinyltransferase — —
Escherichia coli ECOR27 0.40 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase 0.44 NOLOHH_05420 metA homoserine O-succinyltransferase low > 57
Escherichia fergusonii Becca 0.40 EFB2_01398 Phosphoribosylglycinamide formyltransferase 0.44 EFB2_04597 Homoserine O-succinyltransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase 0.44 OHPLBJKB_04037 Homoserine O-succinyltransferase low > 73
Escherichia coli ECRC62 0.40 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase 0.44 BNILDI_06100 metA homoserine O-succinyltransferase — —
Phaeobacter inhibens DSM 17395 0.40 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN 0.61 PGA1_c14560 homoserine O-succinyltransferase MetA 0.72 37
Enterobacter asburiae PDN3 0.40 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.42 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) low > 76
Dinoroseobacter shibae DFL-12 0.40 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) 0.62 Dshi_1593 Homoserine O-succinyltransferase (RefSeq) — —
Enterobacter sp. TBS_079 0.40 MPMX20_03355 Phosphoribosylglycinamide formyltransferase 0.43 MPMX20_00230 Homoserine O-succinyltransferase 0.37 38
Dickeya dianthicola 67-19 0.40 HGI48_RS06065 phosphoribosylglycinamide formyltransferase 0.43 HGI48_RS19155 homoserine O-succinyltransferase low > 71
Escherichia coli BW25113 0.40 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) 0.44 b4013 metA homoserine O-succinyltransferase (NCBI) low > 76
Dickeya dianthicola ME23 0.40 DZA65_RS06415 phosphoribosylglycinamide formyltransferase 0.43 DZA65_RS20275 homoserine O-succinyltransferase low > 75
Escherichia coli ECRC102 0.40 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase 0.44 NIAGMN_11025 metA homoserine O-succinyltransferase — —
Pantoea sp. MT58 0.40 IAI47_05175 phosphoribosylglycinamide formyltransferase 0.43 IAI47_18015 homoserine O-succinyltransferase low > 76
Escherichia coli ECRC98 0.40 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase 0.44 JDDGAC_16900 metA homoserine O-succinyltransferase — —
Escherichia coli ECRC101 0.40 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase 0.44 OKFHMN_13275 metA homoserine O-succinyltransferase — —
Escherichia coli ECRC101 0.40 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase 0.44 MCAODC_03775 metA homoserine O-succinyltransferase — —
Erwinia tracheiphila SCR3 0.40 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase 0.43 LU632_RS22410 metA homoserine O-succinyltransferase low > 74
Dickeya dadantii 3937 0.39 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase 0.43 DDA3937_RS19065 homoserine O-succinyltransferase 0.63 16
Shewanella loihica PV-4 0.39 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) 0.44 Shew_2551 homoserine O-succinyltransferase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.39 MIT1002_02220 Phosphoribosylglycinamide formyltransferase 0.44 MIT1002_01112 Homoserine O-succinyltransferase 0.97 20
Serratia liquefaciens MT49 0.39 IAI46_18890 phosphoribosylglycinamide formyltransferase 0.42 IAI46_23200 homoserine O-succinyltransferase low > 86
Pectobacterium carotovorum WPP14 0.39 HER17_RS15470 phosphoribosylglycinamide formyltransferase 0.44 HER17_RS02285 homoserine O-succinyltransferase low > 75
Klebsiella michiganensis M5al 0.39 BWI76_RS20970 phosphoribosylglycinamide formyltransferase 0.44 BWI76_RS01655 homoserine O-succinyltransferase 0.34 31
Shewanella oneidensis MR-1 0.39 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) 0.44 SO1676 metA homoserine O-succinyltransferase (NCBI ptt file) 0.62 73
Shewanella sp. ANA-3 0.38 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) 0.43 Shewana3_2772 homoserine O-succinyltransferase (RefSeq) low > 73
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS07090 phosphoribosylglycinamide formyltransferase 0.49 HMPREF1078_RS10000 homoserine O-succinyltransferase low > 61
Phocaeicola dorei CL03T12C01 0.28 ABI39_RS06315 phosphoribosylglycinamide formyltransferase 0.48 ABI39_RS10360 homoserine O-succinyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS10780 phosphoribosylglycinamide formyltransferase 0.47 HMPREF1058_RS14680 homoserine O-succinyltransferase low > 67

Not shown: 43 genomes with orthologs for Atu1140 only; 6 genomes with orthologs for Atu2718 only