Conservation of cofitness between Atu2333 and Atu2427 in Agrobacterium fabrum C58

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2333 ATP-dependent RNA helicase 1.0 Atu2427 ABC transporter, membrane spanning protein 0.27 11
Rhizobium sp. OAE497 0.62 ABIE40_RS13915 DEAD/DEAH box helicase 0.87 ABIE40_RS14715 branched-chain amino acid ABC transporter permease LivH low > 107
Sinorhizobium meliloti 1021 0.59 SM_b20880 ATP-dependent RNA helicase 0.87 SMc01951 high-affinity branched-chain amino acid ABC transporter permease low > 103
Phaeobacter inhibens DSM 17395 0.46 PGA1_c11390 putative ATP-dependent RNA helicase RhlE 0.22 PGA1_c02590 putative high-affinity branched-chain amino acid transport system permease protein LivH low > 62
Bosea sp. OAE506 0.42 ABIE41_RS22380 DEAD/DEAH box helicase 0.71 ABIE41_RS13635 branched-chain amino acid ABC transporter permease LivH low > 77
Rhodopseudomonas palustris CGA009 0.39 TX73_019020 DEAD/DEAH box helicase 0.62 TX73_019710 branched-chain amino acid ABC transporter permease low > 86
Azospirillum sp. SherDot2 0.38 MPMX19_02097 ATP-dependent RNA helicase RhlE 0.62 MPMX19_06002 High-affinity branched-chain amino acid transport system permease protein LivH — —
Magnetospirillum magneticum AMB-1 0.38 AMB_RS07215 ATP-dependent helicase 0.63 AMB_RS09135 branched-chain amino acid ABC transporter permease low > 64
Dickeya dadantii 3937 0.37 DDA3937_RS08645 ATP-dependent RNA helicase RhlE 0.50 DDA3937_RS00665 high-affinity branched-chain amino acid ABC transporter permease LivH low > 74
Dickeya dianthicola 67-19 0.37 HGI48_RS08785 ATP-dependent RNA helicase RhlE 0.50 HGI48_RS20725 high-affinity branched-chain amino acid ABC transporter permease LivH low > 71
Erwinia tracheiphila SCR3 0.37 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE 0.48 LU632_RS19250 livH high-affinity branched-chain amino acid ABC transporter permease LivH low > 74
Pectobacterium carotovorum WPP14 0.37 HER17_RS13325 ATP-dependent RNA helicase RhlE 0.50 HER17_RS00500 high-affinity branched-chain amino acid ABC transporter permease LivH low > 75
Dickeya dianthicola ME23 0.37 DZA65_RS09075 ATP-dependent RNA helicase RhlE 0.50 DZA65_RS21735 high-affinity branched-chain amino acid ABC transporter permease LivH low > 75
Rahnella sp. WP5 0.37 EX31_RS23775 ATP-dependent RNA helicase RhlE 0.51 EX31_RS15620 branched-chain amino acid ABC transporter permease low > 89
Escherichia coli BW25113 0.37 b0797 rhlE RNA helicase (NCBI) 0.46 b3457 livH leucine/isoleucine/valine transporter subunit (NCBI) low > 76
Enterobacter sp. TBS_079 0.37 MPMX20_01425 ATP-dependent RNA helicase RhlE 0.52 MPMX20_02821 High-affinity branched-chain amino acid transport system permease protein LivH low > 85
Escherichia coli ECRC102 0.37 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE 0.46 NIAGMN_14515 livH high-affinity branched-chain amino acid ABC transporter permease LivH — —
Escherichia coli ECRC99 0.37 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE 0.46 KEDOAH_11395 livH high-affinity branched-chain amino acid ABC transporter permease LivH — —
Escherichia coli ECRC98 0.37 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE 0.46 JDDGAC_20375 livH high-affinity branched-chain amino acid ABC transporter permease LivH — —
Escherichia coli ECOR38 0.37 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE 0.46 HEPCGN_15565 livH high-affinity branched-chain amino acid ABC transporter permease LivH low > 85
Escherichia coli BL21 0.37 ECD_00764 ATP-dependent RNA helicase 0.46 ECD_03306 branched-chain amino acid ABC transporter permease low > 60
Escherichia coli ECOR27 0.37 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE 0.46 NOLOHH_08540 livH high-affinity branched-chain amino acid ABC transporter permease LivH low > 57
Escherichia coli ECRC101 0.37 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE 0.46 MCAODC_07275 livH high-affinity branched-chain amino acid ABC transporter permease LivH — —
Escherichia coli ECRC101 0.37 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE 0.46 OKFHMN_16745 livH high-affinity branched-chain amino acid ABC transporter permease LivH — —
Escherichia fergusonii Becca 0.37 EFB2_03308 ATP-dependent RNA helicase RhlE 0.46 EFB2_00365 High-affinity branched-chain amino acid transport system permease protein LivH low > 86
Escherichia coli ECRC62 0.37 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE 0.46 BNILDI_02965 livH high-affinity branched-chain amino acid ABC transporter permease LivH — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE 0.46 ECOLIN_RS19770 high-affinity branched-chain amino acid ABC transporter permease LivH low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02916 ATP-dependent RNA helicase RhlE 0.46 OHPLBJKB_00246 High-affinity branched-chain amino acid transport system permease protein LivH low > 73
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2194 Superfamily II DNA and RNA helicases 0.52 EX28DRAFT_0642 Branched-chain amino acid ABC-type transport system, permease components low > 76
Pantoea sp. MT58 0.36 IAI47_13435 ATP-dependent RNA helicase RhlE 0.48 IAI47_01570 high-affinity branched-chain amino acid ABC transporter permease LivH low > 76
Ralstonia solanacearum GMI1000 0.35 RS_RS02695 RNA helicase 0.41 RS_RS12250 branched-chain amino acid ABC transporter permease low > 80
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS02870 RNA helicase 0.52 RR42_RS14420 branched-chain amino acid transporter permease subunit LivH low > 128
Ralstonia solanacearum PSI07 0.35 RPSI07_RS21325 RNA helicase 0.41 RPSI07_RS12695 branched-chain amino acid ABC transporter permease low > 81
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04222 ATP-dependent RNA helicase RhlE 0.40 H281DRAFT_04062 amino acid/amide ABC transporter membrane protein 1, HAAT family low > 103
Paraburkholderia graminis OAS925 0.35 ABIE53_003462 ATP-dependent RNA helicase RhlE 0.40 ABIE53_003285 branched-chain amino acid transport system permease protein low > 113
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS07850 DEAD/DEAH box helicase 0.40 ABZR87_RS00310 branched-chain amino acid ABC transporter permease low > 80
Ralstonia solanacearum UW163 0.34 UW163_RS01715 RNA helicase 0.41 UW163_RS08980 branched-chain amino acid ABC transporter permease — —
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS02265 DEAD/DEAH box helicase 0.42 QEN71_RS03105 branched-chain amino acid ABC transporter permease low > 153
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS11875 RNA helicase 0.41 RALBFv3_RS04690 branched-chain amino acid ABC transporter permease low > 76
Castellaniella sp019104865 MT123 0.34 ABCV34_RS07925 DEAD/DEAH box helicase 0.54 ABCV34_RS09120 branched-chain amino acid ABC transporter permease LivH low > 48
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS08565 RNA helicase 0.50 HSERO_RS08275 branched-chain amino acid transporter permease subunit LivH 0.42 1

Not shown: 12 genomes with orthologs for Atu2333 only; 31 genomes with orthologs for Atu2427 only