Conservation of cofitness between Atu2788 and Atu0897 in Agrobacterium fabrum C58

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2788 citrate lyase, beta subunit 1.0 Atu0897 protease II 0.31 2
Rhizobium sp. OAE497 0.64 ABIE40_RS19025 CoA ester lyase 0.84 ABIE40_RS04845 S9 family peptidase low > 107
Sinorhizobium meliloti 1021 0.53 SMc03793 citrate lyase subunit beta 0.80 SMc00114 protease II oligopeptidase B hydrolase serine protease low > 103
Bosea sp. OAE506 0.44 ABIE41_RS08145 CoA ester lyase 0.53 ABIE41_RS22470 S9 family peptidase low > 77
Rhodopseudomonas palustris CGA009 0.40 TX73_001205 CoA ester lyase 0.55 TX73_008065 S9 family peptidase low > 86
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_03774 citrate lyase beta chain/citryl-CoA lyase subunit 0.50 CCNA_00985 protease II PtrB low > 67
Caulobacter crescentus NA1000 0.38 CCNA_03774 citrate lyase beta chain/citryl-CoA lyase subunit 0.50 CCNA_00985 protease II PtrB low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS01015 CoA ester lyase 0.48 A4249_RS06115 S9 family peptidase low > 48
Kangiella aquimarina DSM 16071 0.27 B158DRAFT_1401 Citrate lyase beta subunit 0.39 B158DRAFT_2324 Protease II low > 40
Klebsiella michiganensis M5al 0.23 BWI76_RS04445 citrate (pro-3S)-lyase subunit beta 0.32 BWI76_RS18075 oligopeptidase B 0.18 26
Enterobacter sp. TBS_079 0.22 MPMX20_03825 Citrate lyase subunit beta 0.32 MPMX20_02752 Protease 2 low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF220 Citrate lyase beta chain (EC 4.1.3.6) 0.31 GFF1624 Protease II (EC 3.4.21.83) low > 78
Rahnella sp. WP5 0.22 EX31_RS17795 citrate (pro-3S)-lyase subunit beta 0.34 EX31_RS24750 prolyl oligopeptidase family serine peptidase low > 89
Enterobacter asburiae PDN3 0.22 EX28DRAFT_3005 citrate lyase, beta subunit 0.31 EX28DRAFT_0709 Protease II low > 76
Dickeya dianthicola ME23 0.21 DZA65_RS10110 citrate (pro-3S)-lyase subunit beta 0.32 DZA65_RS10595 prolyl oligopeptidase family serine peptidase low > 75
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_0896 Citrate lyase beta subunit 0.39 Ga0059261_1842 Protease II low > 68
Dickeya dianthicola 67-19 0.21 HGI48_RS09800 citrate (pro-3S)-lyase subunit beta 0.32 HGI48_RS10180 prolyl oligopeptidase family serine peptidase low > 71
Dickeya dadantii 3937 0.21 DDA3937_RS07835 citrate (pro-3S)-lyase subunit beta 0.33 DDA3937_RS10150 prolyl oligopeptidase family serine peptidase — —
Serratia liquefaciens MT49 0.21 IAI46_16995 citrate (pro-3S)-lyase subunit beta 0.35 IAI46_09975 prolyl oligopeptidase family serine peptidase low > 86
Escherichia coli ECRC101 0.20 OKFHMN_07455 citE citrate (pro-3S)-lyase subunit beta 0.32 OKFHMN_26380 ptrB oligopeptidase B — —
Escherichia coli BL21 0.20 ECD_00584 citrate lyase, citryl-ACP lyase (beta) subunit 0.32 ECD_01816 protease II low > 60
Escherichia coli ECRC101 0.20 MCAODC_26670 citE citrate (pro-3S)-lyase subunit beta 0.32 MCAODC_19025 ptrB oligopeptidase B — —
Escherichia coli ECOR38 0.20 HEPCGN_00820 citE citrate (pro-3S)-lyase subunit beta 0.32 HEPCGN_04780 ptrB oligopeptidase B low > 85
Escherichia fergusonii Becca 0.20 EFB2_03475 Citrate lyase subunit beta 0.32 EFB2_02099 Protease 2 low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03089 Citrate lyase subunit beta 0.32 OHPLBJKB_01886 Protease 2 low > 73
Escherichia coli BW25113 0.20 b0616 citE citrate lyase beta chain (acyl lyase subunit) (VIMSS) 0.32 b1845 ptrB protease II (NCBI) low > 76
Escherichia coli ECRC98 0.20 JDDGAC_11100 citE citrate (pro-3S)-lyase subunit beta 0.32 JDDGAC_00955 ptrB oligopeptidase B — —
Escherichia coli ECRC62 0.20 BNILDI_21840 citE citrate (pro-3S)-lyase subunit beta 0.32 BNILDI_15685 ptrB oligopeptidase B — —
Escherichia coli ECRC99 0.20 KEDOAH_20515 citE citrate (pro-3S)-lyase subunit beta 0.32 KEDOAH_01725 ptrB oligopeptidase B — —
Escherichia coli ECOR27 0.20 NOLOHH_23830 citE citrate lyase subunit beta 0.32 NOLOHH_16890 ptrB oligopeptidase B — —
Pectobacterium carotovorum WPP14 0.20 HER17_RS12170 citrate (pro-3S)-lyase subunit beta 0.33 HER17_RS11765 prolyl oligopeptidase family serine peptidase low > 75
Escherichia coli ECRC102 0.20 NIAGMN_05510 citE citrate lyase subunit beta 0.32 NIAGMN_01680 ptrB oligopeptidase B — —
Vibrio cholerae E7946 ATCC 55056 0.18 CSW01_04125 citrate (pro-3S)-lyase subunit beta 0.17 CSW01_14340 S9 family peptidase low > 62
Dyella japonica UNC79MFTsu3.2 0.17 ABZR86_RS14500 CoA ester lyase 0.13 ABZR86_RS17900 prolyl oligopeptidase family serine peptidase low > 74
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_1831 Citrate lyase beta chain (EC 4.1.3.6) 0.30 Pf6N2E2_2713 Protease II (EC 3.4.21.83) low > 103
Pseudomonas stutzeri RCH2 0.15 Psest_2665 Citrate lyase beta subunit 0.32 Psest_2655 Protease II — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_2171 HpcH/HpaI aldolase 0.31 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A low > 86
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_2171 HpcH/HpaI aldolase 0.31 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A low > 86
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_5615 Citrate lyase beta chain (EC 4.1.3.6) 0.30 Pf1N1B4_3357 Protease II (EC 3.4.21.83) — —
Pseudomonas simiae WCS417 0.14 PS417_14915 host specificity protein 0.29 PS417_07445 peptidase S9 low > 88
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_28780 host specificity protein 0.31 AO356_04360 peptidase S9 — —
Pseudomonas fluorescens SBW25-INTG 0.12 PFLU_RS16935 CoA ester lyase 0.29 PFLU_RS07530 S9 family peptidase low > 109
Pseudomonas fluorescens SBW25 0.12 PFLU_RS16935 CoA ester lyase 0.29 PFLU_RS07530 S9 family peptidase low > 109

Not shown: 20 genomes with orthologs for Atu2788 only; 20 genomes with orthologs for Atu0897 only