Conservation of cofitness between Atu3578 and Atu0765 in Agrobacterium fabrum C58

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3578 glycerol-3-phosphate dehydrogenase 1.0 Atu0765 TldD 0.23 13
Rhizobium sp. OAE497 0.72 ABIE40_RS17885 glycerol-3-phosphate dehydrogenase 0.90 ABIE40_RS04050 metalloprotease TldD low > 107
Azospirillum brasilense Sp245 0.56 AZOBR_RS25870 glycerol-3-phosphate dehydrogenase 0.63 AZOBR_RS10600 peptidase C69 low > 97
Rhodopseudomonas palustris CGA009 0.54 TX73_022860 glycerol-3-phosphate dehydrogenase 0.67 TX73_004255 metalloprotease TldD low > 86
Azospirillum sp. SherDot2 0.53 MPMX19_05967 D-erythritol 1-phosphate dehydrogenase 0.63 MPMX19_00882 Metalloprotease TldD 0.34 93
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS20025 glycerol-3-phosphate dehydrogenase 0.50 ABZR86_RS21715 metalloprotease TldD low > 74
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS04840 glycerol-3-phosphate dehydrogenase 0.48 HSERO_RS07155 peptidase C69 — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS03020 glycerol-3-phosphate dehydrogenase 0.49 ABZR87_RS01105 metalloprotease TldD low > 80
Alteromonas macleodii MIT1002 0.45 MIT1002_00200 Aerobic glycerol-3-phosphate dehydrogenase 0.52 MIT1002_00227 protease TldD — —
Dickeya dadantii 3937 0.44 DDA3937_RS19720 glycerol-3-phosphate dehydrogenase 0.49 DDA3937_RS01460 metalloprotease TldD — —
Rahnella sp. WP5 0.44 EX31_RS05000 glycerol-3-phosphate dehydrogenase 0.47 EX31_RS12265 metalloprotease TldD low > 89
Pseudomonas stutzeri RCH2 0.44 Psest_2775 Glycerol-3-phosphate dehydrogenase 0.48 Psest_3320 Predicted Zn-dependent proteases and their inactivated homologs low > 67
Pantoea sp. MT58 0.44 IAI47_01750 glycerol-3-phosphate dehydrogenase 0.49 IAI47_02465 metalloprotease TldD low > 76
Pectobacterium carotovorum WPP14 0.43 HER17_RS01510 glycerol-3-phosphate dehydrogenase 0.47 HER17_RS20140 metalloprotease TldD — —
Dickeya dianthicola ME23 0.43 DZA65_RS20905 glycerol-3-phosphate dehydrogenase 0.48 DZA65_RS01440 metalloprotease TldD low > 75
Escherichia coli BL21 0.43 ECD_03277 sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding 0.48 ECD_03104 putative peptidase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00278 Aerobic glycerol-3-phosphate dehydrogenase 0.48 OHPLBJKB_00460 Metalloprotease TldD low > 73
Escherichia coli Nissle 1917 0.43 ECOLIN_RS19555 glycerol-3-phosphate dehydrogenase 0.48 ECOLIN_RS18595 metalloprotease TldD low > 52
Escherichia coli BW25113 0.43 b3426 glpD sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) 0.48 b3244 tldD predicted peptidase (NCBI) low > 76
Escherichia coli ECRC62 0.43 BNILDI_02795 glpD glycerol-3-phosphate dehydrogenase 0.48 BNILDI_01980 tldD metalloprotease TldD — —
Escherichia coli ECOR38 0.43 HEPCGN_15745 glpD glycerol-3-phosphate dehydrogenase 0.48 HEPCGN_16620 tldD metalloprotease TldD low > 85
Escherichia coli ECRC101 0.43 MCAODC_07455 glpD glycerol-3-phosphate dehydrogenase 0.48 MCAODC_08275 tldD metalloprotease TldD — —
Escherichia coli ECRC98 0.43 JDDGAC_20555 glpD glycerol-3-phosphate dehydrogenase 0.48 JDDGAC_21380 tldD metalloprotease TldD — —
Escherichia coli ECRC102 0.43 NIAGMN_14695 glpD glycerol-3-phosphate dehydrogenase 0.48 NIAGMN_15515 tldD metalloprotease TldD — —
Escherichia coli ECRC99 0.43 KEDOAH_11215 glpD glycerol-3-phosphate dehydrogenase 0.48 KEDOAH_10395 tldD metalloprotease TldD — —
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4120 Glycerol-3-phosphate dehydrogenase 0.47 EX28DRAFT_3295 Predicted Zn-dependent proteases and their inactivated homologs low > 76
Escherichia fergusonii Becca 0.43 EFB2_00403 Aerobic glycerol-3-phosphate dehydrogenase 0.48 EFB2_00586 Metalloprotease TldD low > 86
Escherichia coli ECRC101 0.43 OKFHMN_16925 glpD glycerol-3-phosphate dehydrogenase 0.48 OKFHMN_17755 tldD metalloprotease TldD — —
Escherichia coli ECOR27 0.43 NOLOHH_08720 glpD glycerol-3-phosphate dehydrogenase 0.48 NOLOHH_09555 tldD metalloprotease TldD low > 57
Serratia liquefaciens MT49 0.42 IAI46_23915 glycerol-3-phosphate dehydrogenase 0.49 IAI46_22685 metalloprotease TldD low > 86
Erwinia tracheiphila SCR3 0.42 LU632_RS23020 glpD glycerol-3-phosphate dehydrogenase 0.47 LU632_RS21420 tldD metalloprotease TldD — —
Enterobacter sp. TBS_079 0.42 MPMX20_04309 Aerobic glycerol-3-phosphate dehydrogenase 0.47 MPMX20_04151 Metalloprotease TldD low > 85
Klebsiella michiganensis M5al 0.41 BWI76_RS26190 glycerol-3-phosphate dehydrogenase 0.48 BWI76_RS25470 metalloprotease TldD low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF587 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.48 GFF2140 TldD protein, part of TldE/TldD proteolytic complex low > 78
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_17495 glycerol-3-phosphate dehydrogenase 0.49 CSW01_02220 metalloprotease TldD low > 62
Mycobacterium tuberculosis H37Rv 0.19 Rv3302c Probable glycerol-3-phosphate dehydrogenase GlpD2 0.08 Rv2315c Conserved protein — —
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS16760 FAD-dependent oxidoreductase 0.49 RR42_RS05875 protease TldD low > 128
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS15405 glycerol-3-phosphate dehydrogenase/oxidase 0.49 LRK54_RS03395 metalloprotease TldD low > 59
Bacteroides stercoris CC31F 0.09 HMPREF1181_RS03275 anaerobic glycerol-3-phosphate dehydrogenase subunit A 0.30 HMPREF1181_RS03165 TldD/PmbA family protein low > 56

Not shown: 4 genomes with orthologs for Atu3578 only; 50 genomes with orthologs for Atu0765 only