Conservation of cofitness between Atu0036 and Atu0142 in Agrobacterium fabrum C58

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0036 hypothetical protein 1.0 Atu0142 cytochrome o ubiquinol oxidase subunit II 0.29 16
Sinorhizobium meliloti 1021 0.75 SMc02563 peptidyl-tRNA hydrolase domain-containing protein 0.64 SM_b21487 cytochrome o ubiquinol oxidase subunit II — —
Lysobacter sp. OAE881 0.44 ABIE51_RS00210 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB 0.53 ABIE51_RS09765 ubiquinol oxidase subunit II — —
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS02010 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB 0.58 ABZR87_RS12895 ubiquinol oxidase subunit II low > 80
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS13465 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB 0.56 ABZR86_RS07625 ubiquinol oxidase subunit II low > 74
Acidovorax sp. GW101-3H11 0.38 Ac3H11_30 Hypothetical protein YaeJ with similarity to translation release factor 0.56 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) low > 79
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_01272 peptidyl-tRNA hydrolase family protein 0.57 CCNA_01851 quinol cytochrome oxidase polypeptide II low > 67
Caulobacter crescentus NA1000 0.38 CCNA_01272 peptidyl-tRNA hydrolase family protein 0.57 CCNA_01851 quinol cytochrome oxidase polypeptide II low > 66
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_18560 class I peptide chain release factor 0.41 AO353_15450 ubiquinol oxidase subunit II low > 101
Variovorax sp. OAS795 0.35 ABID97_RS10980 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB 0.60 ABID97_RS07640 ubiquinol oxidase subunit II low > 91
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF29 Hypothetical protein YaeJ with similarity to translation release factor 0.40 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) low > 78
Klebsiella michiganensis M5al 0.32 BWI76_RS05330 aminoacyl-tRNA hydrolase 0.40 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II low > 92
Enterobacter sp. TBS_079 0.32 MPMX20_00876 Peptidyl-tRNA hydrolase ArfB 0.39 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 85
Escherichia coli BW25113 0.32 b0191 yaeJ hypothetical protein (NCBI) 0.40 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.44 8
Enterobacter asburiae PDN3 0.31 EX28DRAFT_3780 RF-1 domain 0.39 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II low > 76
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_05089 ribosome-associated protein 0.39 H281DRAFT_03426 cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-) low > 103
Escherichia coli ECRC62 0.31 BNILDI_09230 arfB aminoacyl-tRNA hydrolase 0.40 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECOR27 0.31 NOLOHH_02440 arfB aminoacyl-tRNA hydrolase 0.40 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_03471 Peptidyl-tRNA hydrolase ArfB 0.40 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 73
Escherichia coli ECOR38 0.31 HEPCGN_08050 arfB aminoacyl-tRNA hydrolase 0.40 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II low > 85
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS23175 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB 0.43 QEN71_RS13340 ubiquinol oxidase subunit II low > 153
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS07990 peptide chain release factor I 0.44 BPHYT_RS24915 ubiquinol oxidase subunit II — —
Escherichia coli Nissle 1917 0.31 ECOLIN_RS01040 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB 0.40 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II — —
Rahnella sp. WP5 0.31 EX31_RS12915 aminoacyl-tRNA hydrolase 0.37 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II low > 89
Escherichia fergusonii Becca 0.31 EFB2_03852 Peptidyl-tRNA hydrolase ArfB 0.40 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 86
Escherichia coli BL21 0.31 ECD_00190 alternative stalled-ribosome rescue factor B; peptidyl-tRNA hydrolase, ribosome-attached 0.40 ECD_00383 cytochrome o ubiquinol oxidase subunit II low > 60
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS19995 class I peptide chain release factor 0.57 RR42_RS22210 cytochrome O ubiquinol oxidase — —
Serratia liquefaciens MT49 0.31 IAI46_20110 aminoacyl-tRNA hydrolase 0.39 IAI46_04985 cytochrome o ubiquinol oxidase subunit II low > 86
Escherichia coli ECRC98 0.30 JDDGAC_13690 arfB aminoacyl-tRNA hydrolase 0.39 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC101 0.30 OKFHMN_10095 arfB aminoacyl-tRNA hydrolase 0.39 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC102 0.30 NIAGMN_07945 arfB aminoacyl-tRNA hydrolase 0.39 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC99 0.30 KEDOAH_18060 arfB aminoacyl-tRNA hydrolase 0.39 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC101 0.30 MCAODC_00610 arfB aminoacyl-tRNA hydrolase 0.39 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II — —
Shewanella loihica PV-4 0.30 Shew_3362 hypothetical protein (RefSeq) 0.42 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) — —
Erwinia tracheiphila SCR3 0.24 LU632_RS19850 arfB aminoacyl-tRNA hydrolase 0.42 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II — —

Not shown: 41 genomes with orthologs for Atu0036 only; 5 genomes with orthologs for Atu0142 only