Conservation of cofitness between AO353_16875 and AO353_08765 in Pseudomonas fluorescens FW300-N2E3

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_16875 ribosomal protein S12 methylthiotransferase RimO 1.0 AO353_08765 hypothetical protein 0.38 2
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_4653 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.87 PfGW456L13_895 FIG001590: Putative conserved exported protein precursor low > 87
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.88 Pf1N1B4_2228 FIG001590: Putative conserved exported protein precursor low > 87
Pseudomonas sp. RS175 0.97 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO 0.88 PFR28_04322 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_05600 ribosomal protein S12 methylthiotransferase RimO 0.86 AO356_13005 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.87 Pf6N2E2_4479 FIG001590: Putative conserved exported protein precursor low > 103
Pseudomonas fluorescens SBW25 0.96 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.79 PFLU_RS28950 YecA family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.79 PFLU_RS28950 YecA family protein 0.15 77
Pseudomonas simiae WCS417 0.96 PS417_05880 ribosomal protein S12 methylthiotransferase 0.78 PS417_27290 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.74 Psyr_0320 Protein of unknown function UPF0149 low > 86
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.74 Psyr_0320 Protein of unknown function UPF0149 low > 86
Pseudomonas putida KT2440 0.89 PP_1197 ribosomal protein S12 methylthiotransferase 0.68 PP_5201 conserved protein of unknown function, UPF0149 family low > 96
Pseudomonas sp. S08-1 0.85 OH686_18875 ribosomal protein S12 methylthiotransferase RimO 0.75 OH686_11210 Putative conserved exported protein precursor low > 80
Pseudomonas stutzeri RCH2 0.83 Psest_2632 ribosomal protein S12 methylthiotransferase RimO 0.73 Psest_0174 Uncharacterized protein conserved in bacteria low > 67
Marinobacter adhaerens HP15 0.75 HP15_2459 MiaB-like tRNA modifying enzyme YliG 0.22 HP15_3204 yecA family protein low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.19 GFF3010 UPF0149 exported protein YgfB low > 78
Erwinia tracheiphila SCR3 0.72 LU632_RS09580 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.20 LU632_RS05875 YecA family protein low > 74
Escherichia coli BW25113 0.72 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) 0.17 b2909 ygfB orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC102 0.72 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.17 NIAGMN_17265 ygfB UPF0149 family protein YgfB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO 0.17 OHPLBJKB_00806 hypothetical protein low > 73
Escherichia coli ECOR27 0.72 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.17 NOLOHH_11410 ygfB UPF0149 family protein YgfB low > 75
Escherichia coli BL21 0.72 ECD_00802 ribosomal protein S12 methylthiotransferase 0.17 ECD_02741 UPF0149 family protein low > 61
Escherichia coli ECRC98 0.72 JDDGAC_09695 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.17 JDDGAC_23140 ygfB UPF0149 family protein YgfB low > 86
Escherichia coli ECOR38 0.72 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.17 HEPCGN_18790 ygfB UPF0149 family protein YgfB low > 87
Escherichia coli ECRC62 0.72 BNILDI_20690 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.17 BNILDI_09945 ygfB UPF0149 family protein YgfB low > 75
Escherichia coli ECRC99 0.72 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.17 KEDOAH_08640 ygfB UPF0149 family protein YgfB — —
Escherichia coli ECRC101 0.72 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.17 MCAODC_10020 ygfB UPF0149 family protein YgfB low > 87
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2131 ribosomal protein S12 methylthiotransferase RimO 0.17 EX28DRAFT_2961 yecA family protein low > 76
Escherichia coli Nissle 1917 0.72 ECOLIN_RS04440 30S ribosomal protein S12 methylthiotransferase RimO 0.17 ECOLIN_RS16195 UPF0149 family protein YgfB — —
Escherichia coli ECRC100 0.72 OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.17 OKFHMN_19500 ygfB UPF0149 family protein YgfB low > 80
Escherichia fergusonii Becca 0.72 EFB2_03271 Ribosomal protein S12 methylthiotransferase RimO 0.17 EFB2_00993 hypothetical protein low > 86
Klebsiella michiganensis M5al 0.72 BWI76_RS09115 30S ribosomal protein S12 methylthiotransferase RimO 0.16 BWI76_RS23900 hypothetical protein low > 92
Enterobacter sp. TBS_079 0.71 MPMX20_01473 Ribosomal protein S12 methylthiotransferase RimO 0.17 MPMX20_03768 hypothetical protein low > 85
Dickeya dianthicola 67-19 0.71 HGI48_RS09400 30S ribosomal protein S12 methylthiotransferase RimO 0.16 HGI48_RS02355 YecA family protein low > 71
Pectobacterium carotovorum WPP14 0.71 HER17_RS12755 30S ribosomal protein S12 methylthiotransferase RimO 0.16 HER17_RS19110 YecA family protein low > 75
Dickeya dianthicola ME23 0.70 DZA65_RS09710 30S ribosomal protein S12 methylthiotransferase RimO 0.16 DZA65_RS02460 YecA family protein low > 75
Dickeya dadantii 3937 0.70 DDA3937_RS09385 30S ribosomal protein S12 methylthiotransferase RimO 0.15 DDA3937_RS02400 YecA family protein low > 74
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_2522 SSU ribosomal protein S12P methylthiotransferase (EC 2.-.-.-) 0.23 B158DRAFT_0532 Uncharacterized protein conserved in bacteria low > 40
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO 0.16 CSW01_12530 YecA family protein low > 62
Alteromonas macleodii MIT1002 0.68 MIT1002_01933 Ribosomal protein S12 methylthiotransferase RimO 0.24 MIT1002_02985 yecA family protein low > 70
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS01780 30S ribosomal protein S12 methylthiotransferase RimO 0.17 LRK54_RS11690 UPF0149 family protein low > 59
Rhodanobacter denitrificans MT42 0.64 LRK55_RS01560 30S ribosomal protein S12 methylthiotransferase RimO 0.17 LRK55_RS11415 UPF0149 family protein — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_04755 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.16 OKGIIK_12205 hypothetical protein low > 52
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS08100 30S ribosomal protein S12 methylthiotransferase RimO 0.17 ABZR86_RS11975 UPF0149 family protein low > 74

Not shown: 44 genomes with orthologs for AO353_16875 only; 3 genomes with orthologs for AO353_08765 only