Conservation of cofitness between ABZR87_RS18215 and ABZR87_RS18220 in Ralstonia sp. UNC404CL21Col

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS18215 DNA-binding transcriptional regulator 1.0 ABZR87_RS18220 D-xylose ABC transporter substrate-binding protein 0.43 5
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS32830 AraC family transcriptional regulator 0.89 BPHYT_RS32820 xylose ABC transporter substrate-binding protein low > 109
Paraburkholderia graminis OAS925 0.79 ABIE53_004928 LacI family transcriptional regulator 0.89 ABIE53_004930 D-xylose transport system substrate-binding protein 0.52 3
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_03875 transcriptional regulator, AraC family 0.88 H281DRAFT_03877 xylose-binding protein low > 103
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS25880 DNA-binding transcriptional regulator 0.86 QEN71_RS25870 D-xylose ABC transporter substrate-binding protein 0.89 4
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS22455 AraC family transcriptional regulator 0.76 HSERO_RS22460 xylose ABC transporter substrate-binding protein 0.93 2
Pseudomonas simiae WCS417 0.64 PS417_10950 AraC family transcriptional regulator 0.75 PS417_10940 sugar ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_28495 AraC family transcriptional regulator 0.76 AO356_28505 sugar ABC transporter substrate-binding protein 0.60 5
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_2882 transcriptional regulator, AraC family 0.76 Psyr_2884 xylose-binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_2882 transcriptional regulator, AraC family 0.76 Psyr_2884 xylose-binding protein low > 86
Pseudomonas fluorescens SBW25 0.64 PFLU_RS11310 DNA-binding transcriptional regulator 0.76 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_1453 Xylose activator XylR (AraC family) 0.76 Pf6N2E2_1455 Xylose ABC transporter, periplasmic xylose-binding protein XylF low > 103
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS11310 DNA-binding transcriptional regulator 0.76 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein low > 109
Pseudomonas sp. RS175 0.63 PFR28_02347 Xylose operon regulatory protein 0.76 PFR28_02349 D-xylose-binding periplasmic protein 0.75 2
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS14435 DNA-binding transcriptional regulator 0.70 ABZR86_RS14420 D-xylose ABC transporter substrate-binding protein low > 74
Enterobacter asburiae PDN3 0.45 EX28DRAFT_3834 Transcriptional regulators 0.57 EX28DRAFT_3831 D-xylose ABC transporter, substrate-binding protein low > 76
Pectobacterium carotovorum WPP14 0.45 HER17_RS21065 XylR family transcriptional regulator 0.56 HER17_RS21080 D-xylose ABC transporter substrate-binding protein low > 75
Enterobacter sp. TBS_079 0.45 MPMX20_00161 Xylose operon regulatory protein 0.57 MPMX20_00164 D-xylose-binding periplasmic protein 0.82 3
Rahnella sp. WP5 0.45 EX31_RS09745 XylR family transcriptional regulator 0.57 EX31_RS09760 D-xylose ABC transporter substrate-binding protein low > 89
Pantoea sp. MT58 0.44 IAI47_00175 XylR family transcriptional regulator 0.58 IAI47_00190 D-xylose ABC transporter substrate-binding protein low > 76
Dickeya dianthicola ME23 0.44 DZA65_RS00330 DNA-binding transcriptional regulator 0.58 DZA65_RS00315 D-xylose ABC transporter substrate-binding protein low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS00330 XylR family transcriptional regulator 0.58 HGI48_RS00315 D-xylose ABC transporter substrate-binding protein low > 71
Dickeya dadantii 3937 0.44 DDA3937_RS20915 DNA-binding transcriptional regulator 0.58 DDA3937_RS20930 D-xylose ABC transporter substrate-binding protein low > 74
Serratia liquefaciens MT49 0.44 IAI46_00300 DNA-binding transcriptional regulator 0.58 IAI46_00285 D-xylose ABC transporter substrate-binding protein low > 86
Klebsiella michiganensis M5al 0.43 BWI76_RS27045 XylR family transcriptional regulator 0.57 BWI76_RS27030 D-xylose transporter subunit XylF low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00135 Xylose operon regulatory protein 0.58 OHPLBJKB_00138 D-xylose-binding periplasmic protein low > 73
Escherichia coli BW25113 0.43 b3569 xylR DNA-binding transcriptional activator, xylose-binding (NCBI) 0.58 b3566 xylF D-xylose transporter subunit (NCBI) 0.57 3
Escherichia coli ECRC101 0.43 MCAODC_06450 xylR DNA-binding transcriptional regulator XylR 0.58 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein low > 87
Escherichia coli ECOR38 0.43 HEPCGN_14820 xylR DNA-binding transcriptional regulator XylR 0.58 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein low > 87
Escherichia coli ECRC102 0.43 NIAGMN_13695 xylR DNA-binding transcriptional regulator XylR 0.58 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein — —
Escherichia coli BL21 0.43 ECD_03421 xylose divergent operon transcriptional activator 0.58 ECD_03418 D-xylose transporter subunit low > 61
Escherichia coli ECOR27 0.43 NOLOHH_07880 xylR DNA-binding transcriptional regulator XylR 0.58 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein low > 75
Escherichia coli ECRC62 0.43 BNILDI_03665 xylR DNA-binding transcriptional regulator XylR 0.58 BNILDI_03650 xylF D-xylose ABC transporter substrate-binding protein low > 75
Escherichia coli ECRC99 0.43 KEDOAH_12215 xylR DNA-binding transcriptional regulator XylR 0.58 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein — —
Escherichia coli ECRC100 0.43 OKFHMN_15935 xylR DNA-binding transcriptional regulator XylR 0.58 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein low > 80
Escherichia coli ECRC98 0.43 JDDGAC_19565 xylR DNA-binding transcriptional regulator XylR 0.58 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein low > 86
Escherichia coli Nissle 1917 0.43 ECOLIN_RS20410 D-xylose utilization transcriptional activator XylR 0.58 ECOLIN_RS20395 D-xylose ABC transporter substrate-binding protein low > 55
Escherichia fergusonii Becca 0.43 EFB2_00238 Xylose operon regulatory protein 0.58 EFB2_00241 D-xylose-binding periplasmic protein low > 86

Not shown: 3 genomes with orthologs for ABZR87_RS18215 only; 10 genomes with orthologs for ABZR87_RS18220 only