Conservation of cofitness between ABZR86_RS14790 and ABZR86_RS19880 in Dyella japonica UNC79MFTsu3.2

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dyella japonica UNC79MFTsu3.2 1.0 ABZR86_RS14790 helix-turn-helix transcriptional regulator 1.0 ABZR86_RS19880 AI-2E family transporter 0.45 16
Azospirillum brasilense Sp245 0.37 AZOBR_RS31815 AraC family transcriptional regulator 0.31 AZOBR_RS16275 membrane protein low > 97
Rhodospirillum rubrum S1H 0.36 Rru_A3128 Transcriptional Regulator, AraC family (NCBI) 0.26 Rru_A2164 Protein of unknown function UPF0118 (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_2138 transcriptional regulator, AraC family 0.08 Ga0059261_2014 Predicted permease low > 68
Paraburkholderia graminis OAS925 0.33 ABIE53_001863 AraC-like DNA-binding protein 0.26 ABIE53_000873 putative PurR-regulated permease PerM low > 113
Serratia liquefaciens MT49 0.33 IAI46_04670 helix-turn-helix transcriptional regulator 0.13 IAI46_18795 AI-2E family transporter low > 86
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS17565 helix-turn-helix transcriptional regulator 0.27 ABZR87_RS00920 AI-2E family transporter low > 80
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_06000 transcriptional regulator, AraC family 0.26 H281DRAFT_04709 Predicted PurR-regulated permease PerM low > 103
Herbaspirillum seropedicae SmR1 0.29 HSERO_RS21185 transcriptional regulator 0.24 HSERO_RS03160 ABC transporter permease low > 78
Azospirillum sp. SherDot2 0.28 MPMX19_06866 HTH-type transcriptional regulator NimR 0.30 MPMX19_01301 AI-2 transport protein TqsA low > 112
Enterobacter sp. TBS_079 0.27 MPMX20_03527 HTH-type transcriptional regulator NimR 0.14 MPMX20_03343 Putative transport protein YhhT low > 85
Klebsiella michiganensis M5al 0.26 BWI76_RS21700 AraC family transcriptional regulator 0.15 BWI76_RS20920 AI-2E family transporter low > 92
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS27470 AraC family transcriptional regulator 0.25 BPHYT_RS03635 ABC transporter permease — —
Shewanella oneidensis MR-1 0.25 SO3488 transcriptional regulator, AraC/XylS family (NCBI ptt file) 0.13 SO2867 permease PerM, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.24 Shew_3550 AraC family transcriptional regulator (RefSeq) 0.10 Shew_1843 hypothetical protein (RefSeq) — —
Escherichia coli Nissle 1917 0.23 ECOLIN_RS09975 DNA-binding transcriptional regulator NimR 0.14 ECOLIN_RS14160 AI-2E family transporter low > 55
Escherichia fergusonii Becca 0.23 EFB2_02205 HTH-type transcriptional regulator NimR 0.14 EFB2_01405 Putative transport protein YhhT low > 86
Escherichia coli BL21 0.23 ECD_01759 putative DNA-binding transcriptional regulator 0.14 ECD_02385 putative UPF0118 family inner membrane permease — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_01943 HTH-type transcriptional regulator NimR 0.14 OHPLBJKB_01233 Putative transport protein YhhT low > 73
Escherichia coli ECOR27 0.23 NOLOHH_17210 nimR DNA-binding transcriptional regulator NimR 0.14 NOLOHH_13490 perM Putative permease PerM low > 75
Escherichia coli ECOR38 0.23 HEPCGN_05070 nimR DNA-binding transcriptional regulator NimR 0.14 HEPCGN_21005 perM Putative permease PerM low > 87
Escherichia coli ECRC62 0.23 BNILDI_15995 nimR DNA-binding transcriptional regulator NimR 0.14 BNILDI_12300 perM Putative permease PerM low > 75
Escherichia coli BW25113 0.23 b1790 yeaM predicted DNA-binding transcriptional regulator (NCBI) 0.14 b2493 yfgO predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC99 0.22 KEDOAH_01430 nimR DNA-binding transcriptional regulator NimR 0.14 KEDOAH_06380 perM Putative permease PerM — —
Escherichia coli ECRC101 0.22 MCAODC_18730 nimR DNA-binding transcriptional regulator NimR 0.14 MCAODC_12370 perM Putative permease PerM low > 87
Escherichia coli ECRC98 0.22 JDDGAC_01255 nimR DNA-binding transcriptional regulator NimR 0.14 JDDGAC_25785 perM Putative permease PerM low > 86
Escherichia coli ECRC100 0.22 OKFHMN_26680 nimR DNA-binding transcriptional regulator NimR 0.14 OKFHMN_21840 perM Putative permease PerM low > 80
Escherichia coli ECRC102 0.22 NIAGMN_01385 nimR DNA-binding transcriptional regulator NimR 0.14 NIAGMN_19610 perM Putative permease PerM — —
Rahnella sp. WP5 0.21 EX31_RS19615 helix-turn-helix transcriptional regulator 0.14 EX31_RS22725 AI-2E family transporter low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF3466 Transcriptional regulator, AraC family 0.14 GFF2176 Putative permease PerM (= YfgO) low > 78

Not shown: 2 genomes with orthologs for ABZR86_RS14790 only; 54 genomes with orthologs for ABZR86_RS19880 only