Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Brevundimonas sp. GW460-12-10-14-LB2 | 1.0 | A4249_RS00615 | | threonine ammonia-lyase, biosynthetic | 1.0 | A4249_RS09675 | | siroheme synthase CysG | 0.99 | 3 |
Pseudomonas stutzeri RCH2 | 0.58 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | 0.41 | Psest_2037 | | uroporphyrin-III C-methyltransferase | low | > 67 |
Castellaniella sp019104865 MT123 | 0.58 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | 0.34 | ABCV34_RS00210 | | siroheme synthase CysG | low | > 48 |
Pseudomonas sp. S08-1 | 0.56 | OH686_11400 | | threonine ammonia-lyase, biosynthetic | 0.38 | OH686_00285 | | Precorrin-2 oxidase or Sirohydrochlorin ferrochelatase activity of CysG / Uroporphyrinogen-III methyltransferase | low | > 80 |
Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_08485 | | threonine dehydratase | 0.40 | AO353_27625 | | sirohydrochlorin ferrochelatase | — | — |
Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.39 | PfGW456L13_2656 | | Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) | 0.76 | 5 |
Pseudomonas putida KT2440 | 0.55 | PP_5149 | | threonine deaminase | 0.38 | PP_3999 | | Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase | 0.19 | 39 |
Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | 0.40 | PFLU_RS18505 | | uroporphyrinogen-III C-methyltransferase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | 0.40 | PFLU_RS18505 | | uroporphyrinogen-III C-methyltransferase | 0.40 | 20 |
Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.40 | Pf6N2E2_302 | | Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) | 0.49 | 52 |
Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.39 | Pf1N1B4_4065 | | Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) | 0.79 | 10 |
Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_10330 | | threonine dehydratase | 0.39 | AO356_22200 | | sirohydrochlorin ferrochelatase | 0.68 | 30 |
Pseudomonas sp. RS175 | 0.54 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | 0.39 | PFR28_02603 | | Siroheme synthase | 0.58 | 13 |
Pseudomonas simiae WCS417 | 0.54 | PS417_27010 | | threonine dehydratase | 0.40 | PS417_16465 | | sirohydrochlorin ferrochelatase | 0.60 | 38 |
Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_4846 | | L-threonine ammonia-lyase | 0.40 | Psyr_3174 | | uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_4846 | | L-threonine ammonia-lyase | 0.40 | Psyr_3174 | | uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase | low | > 86 |
Dickeya dadantii 3937 | 0.53 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | 0.34 | DDA3937_RS16930 | | uroporphyrinogen-III C-methyltransferase | 0.83 | 23 |
Dickeya dianthicola 67-19 | 0.53 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | 0.35 | HGI48_RS17000 | | uroporphyrinogen-III C-methyltransferase | low | > 71 |
Escherichia coli ECOR38 | 0.51 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | 0.35 | HEPCGN_16010 | cysG | siroheme synthase CysG | 0.96 | 13 |
Escherichia coli ECRC62 | 0.51 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | 0.36 | BNILDI_02540 | cysG | siroheme synthase CysG | 0.96 | 40 |
Escherichia coli BL21 | 0.51 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | 0.35 | ECD_03219 | | fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase | 0.68 | 55 |
Escherichia coli ECOR27 | 0.51 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | 0.36 | NOLOHH_08980 | cysG | siroheme synthase CysG | 0.87 | 48 |
Escherichia coli ECRC99 | 0.51 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | 0.35 | KEDOAH_10960 | cysG | siroheme synthase CysG | — | — |
Escherichia coli BW25113 | 0.51 | b3772 | ilvA | threonine dehydratase (NCBI) | 0.35 | b3368 | cysG | fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase (NCBI) | 0.94 | 19 |
Escherichia coli ECRC102 | 0.51 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | 0.35 | NIAGMN_14950 | cysG | siroheme synthase CysG | — | — |
Escherichia coli ECRC101 | 0.51 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | 0.35 | MCAODC_07710 | cysG | siroheme synthase CysG | 0.73 | 66 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.51 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | 0.35 | OHPLBJKB_00334 | | Siroheme synthase | low | > 73 |
Escherichia coli ECRC100 | 0.51 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | 0.35 | OKFHMN_17180 | cysG | siroheme synthase CysG | 0.98 | 29 |
Escherichia coli ECRC98 | 0.51 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | 0.35 | JDDGAC_20810 | cysG | siroheme synthase CysG | low | > 86 |
Klebsiella michiganensis M5al | 0.51 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | 0.35 | BWI76_RS26055 | | siroheme synthase | 0.82 | 48 |
Escherichia fergusonii Becca | 0.51 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | 0.35 | EFB2_00454 | | Siroheme synthase | low | > 86 |
Escherichia coli Nissle 1917 | 0.51 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | 0.35 | ECOLIN_RS19285 | | siroheme synthase CysG | 0.91 | 2 |
Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | 0.36 | EX28DRAFT_2849 | | uroporphyrin-III C-methyltransferase | 0.74 | 34 |
Rhodanobacter sp. FW510-T8 | 0.50 | OKGIIK_13620 | ilvA | threonine ammonia-lyase, biosynthetic | 0.33 | OKGIIK_05980 | cysG | siroheme synthase CysG | low | > 52 |
Erwinia tracheiphila SCR3 | 0.50 | LU632_RS24395 | ilvA | threonine ammonia-lyase, biosynthetic | 0.37 | LU632_RS06420 | cysG | siroheme synthase CysG | 0.91 | 15 |
Pantoea sp. MT58 | 0.50 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | 0.38 | IAI47_04175 | | uroporphyrinogen-III C-methyltransferase | 0.83 | 56 |
Enterobacter sp. TBS_079 | 0.50 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | 0.36 | MPMX20_03639 | | Siroheme synthase | low | > 85 |
Serratia liquefaciens MT49 | 0.50 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | 0.37 | IAI46_23670 | | uroporphyrinogen-III C-methyltransferase | low | > 86 |
Dickeya dianthicola ME23 | 0.50 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | 0.35 | DZA65_RS18075 | | uroporphyrinogen-III C-methyltransferase | 0.84 | 33 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.36 | GFF3700 | | Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) | low | > 78 |
Pectobacterium carotovorum WPP14 | 0.49 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | 0.38 | HER17_RS01835 | | siroheme synthase CysG | low | > 75 |
Rahnella sp. WP5 | 0.49 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | 0.37 | EX31_RS07885 | | uroporphyrinogen-III C-methyltransferase | 0.85 | 61 |
Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS10300 | | threonine ammonia-lyase, biosynthetic | 0.32 | LRK54_RS00910 | | siroheme synthase CysG | 0.29 | 29 |
Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS09940 | | threonine ammonia-lyase, biosynthetic | 0.31 | LRK55_RS00685 | | siroheme synthase CysG | low | > 63 |
Alteromonas macleodii MIT1002 | 0.47 | MIT1002_04040 | | L-threonine dehydratase biosynthetic IlvA | 0.39 | MIT1002_00665 | | Siroheme synthase | — | — |
Acinetobacter radioresistens SK82 | 0.45 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | 0.38 | MPMX26_00706 | | Siroheme synthase | — | — |
Not shown: 23 genomes with orthologs for A4249_RS00615 only; 8 genomes with orthologs for A4249_RS09675 only