Conservation of cofitness between Sama_2069 and Sama_2869 in Shewanella amazonensis SB2B

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2069 MarR family transcriptional regulator (RefSeq) 1.0 Sama_2869 ABC transporter, periplasmic substrate-binding protein, putative (RefSeq) 0.50 15
Shewanella sp. ANA-3 0.83 Shewana3_1739 MarR family transcriptional regulator (RefSeq) 0.63 Shewana3_3272 periplasmic binding protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.82 SO2640 transcriptional regulator, MarR family (NCBI ptt file) 0.61 SO3709 ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) 0.44 19
Shewanella loihica PV-4 0.78 Shew_1552 MarR family transcriptional regulator (RefSeq) 0.65 Shew_0719 periplasmic binding protein (RefSeq)
Rhizobium sp. OAE497 0.27 ABIE40_RS00485 MarR family winged helix-turn-helix transcriptional regulator 0.12 ABIE40_RS14425 hemin ABC transporter substrate-binding protein
Sinorhizobium meliloti 1021 0.25 SMc02851 transcriptional regulator 0.12 SMc01512 hemin binding periplasmic transmembrane protein low > 103
Variovorax sp. SCN45 0.24 GFF4768 Transcriptional regulator, MarR family 0.18 GFF871 Vitamin B12 ABC transporter, substrate-binding protein BtuF low > 127
Agrobacterium fabrum C58 0.23 Atu0109 transcriptional regulator, MarR family 0.13 Atu2460 ABC transporter, substrate binding protein (hemin) low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3754 Transcriptional regulator, MarR family 0.15 GFF3984 Vitamin B12 ABC transporter, B12-binding component BtuF low > 90
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_3467 Transcriptional regulator, MarR family 0.25 PfGW456L13_1323 Vitamin B12 ABC transporter, B12-binding component BtuF low > 87
Paraburkholderia graminis OAS925 0.22 ABIE53_002455 DNA-binding MarR family transcriptional regulator 0.34 ABIE53_001251 iron complex transport system substrate-binding protein low > 113
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_18435 MarR family transcriptional regulator 0.25 AO353_06665 iron-hydroxamate ABC transporter substrate-binding protein low > 101
Pseudomonas putida KT2440 0.22 PP_4515 Transcriptional regulator, MarR family 0.24 PP_0524 putative Periplasmic cobalamin-binding protein HutB low > 96
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS10020 MFS transporter 0.35 BPHYT_RS04880 cobalamin-binding protein
Marinobacter adhaerens HP15 0.21 HP15_3821 transcriptional regulator, MarR family 0.31 HP15_3954 substrate-binding periplasmic (PBP) ABC transporter protein low > 73
Pseudomonas simiae WCS417 0.21 PS417_19945 MarR family transcriptional regulator 0.27 PS417_25220 iron-hydroxamate ABC transporter substrate-binding protein low > 88
Azospirillum brasilense Sp245 0.21 AZOBR_RS02005 transcriptional regulator 0.12 AZOBR_RS29430 hemin ABC transporter substrate-binding protein
Pseudomonas sp. RS175 0.21 PFR28_00789 Transcriptional regulator SlyA 0.21 PFR28_03939 Vitamin B12-binding protein
Pseudomonas fluorescens SBW25 0.21 PFLU_RS21915 MarR family transcriptional regulator 0.26 PFLU_RS26855 cobalamin-binding protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_04045 MarR family transcriptional regulator 0.25 AO356_14980 iron-hydroxamate ABC transporter substrate-binding protein
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2644 Transcriptional regulator SlyA 0.23 Pf6N2E2_4929 Vitamin B12 ABC transporter, B12-binding component BtuF
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS21915 MarR family transcriptional regulator 0.26 PFLU_RS26855 cobalamin-binding protein low > 109
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS21095 MarR family winged helix-turn-helix transcriptional regulator 0.13 ABZR88_RS12705 helical backbone metal receptor low > 71
Escherichia coli Nissle 1917 0.20 ECOLIN_RS09160 transcriptional regulator SlyA 0.27 ECOLIN_RS00880 vitamin B12 ABC transporter substrate-binding protein BtuF
Escherichia fergusonii Becca 0.20 EFB2_02350 Transcriptional regulator SlyA 0.27 EFB2_03886 Vitamin B12-binding protein low > 86
Escherichia coli ECOR38 0.20 HEPCGN_05860 slyA transcriptional regulator SlyA 0.27 HEPCGN_08220 btuF vitamin B12 ABC transporter substrate-binding protein BtuF low > 87
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS14780 MarR family transcriptional regulator 0.13 ABZR86_RS10435 cobalamin-binding protein low > 74
Escherichia coli ECRC98 0.19 JDDGAC_02065 slyA transcriptional regulator SlyA 0.27 JDDGAC_13865 btuF vitamin B12 ABC transporter substrate-binding protein BtuF low > 86
Escherichia coli ECRC62 0.19 BNILDI_16785 slyA transcriptional regulator SlyA 0.27 BNILDI_09055 btuF vitamin B12 ABC transporter substrate-binding protein BtuF low > 75
Escherichia coli BL21 0.19 ECD_01612 global transcriptional regulator 0.27 ECD_00157 vitamin B12 ABC transporter periplasmic binding protein
Escherichia coli ECRC102 0.19 NIAGMN_00590 slyA transcriptional regulator SlyA 0.27 NIAGMN_08120 btuF vitamin B12 ABC transporter substrate-binding protein BtuF
Escherichia coli ECRC101 0.19 MCAODC_17935 slyA transcriptional regulator SlyA 0.27 MCAODC_00785 btuF vitamin B12 ABC transporter substrate-binding protein BtuF low > 87
Escherichia coli ECRC100 0.19 OKFHMN_27475 slyA transcriptional regulator SlyA 0.27 OKFHMN_10270 btuF vitamin B12 ABC transporter substrate-binding protein BtuF
Escherichia coli ECOR27 0.19 NOLOHH_17995 slyA transcriptional regulator SlyA 0.27 NOLOHH_02615 btuF vitamin B12 ABC transporter substrate-binding protein BtuF
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_02083 Transcriptional regulator SlyA 0.27 OHPLBJKB_03504 Vitamin B12-binding protein low > 73
Escherichia coli ECRC99 0.19 KEDOAH_00630 slyA transcriptional regulator SlyA 0.27 KEDOAH_17885 btuF vitamin B12 ABC transporter substrate-binding protein BtuF
Escherichia coli BW25113 0.19 b1642 slyA transcriptional regulator for cryptic hemolysin (VIMSS) 0.27 b0158 btuF vitamin B12-transporter protein BtuF (NCBI) low > 76
Fusobacterium nucleatum SB010 0.19 HUW76_01080 MarR family transcriptional regulator 0.14 HUW76_04675 ABC transporter substrate-binding protein low > 35
Pseudomonas sp. S08-1 0.18 OH686_20685 Transcriptional regulator SlyA 0.25 OH686_15750 Vitamin B12 ABC transporter, substrate-binding protein BtuF

Not shown: 6 genomes with orthologs for Sama_2069 only; 33 genomes with orthologs for Sama_2869 only