Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Shewanella amazonensis SB2B | 1.0 | Sama_2069 | | MarR family transcriptional regulator (RefSeq) | 1.0 | Sama_2869 | | ABC transporter, periplasmic substrate-binding protein, putative (RefSeq) | 0.50 | 15 |
Shewanella sp. ANA-3 | 0.83 | Shewana3_1739 | | MarR family transcriptional regulator (RefSeq) | 0.63 | Shewana3_3272 | | periplasmic binding protein (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.82 | SO2640 | | transcriptional regulator, MarR family (NCBI ptt file) | 0.61 | SO3709 | | ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) | 0.44 | 19 |
Shewanella loihica PV-4 | 0.78 | Shew_1552 | | MarR family transcriptional regulator (RefSeq) | 0.65 | Shew_0719 | | periplasmic binding protein (RefSeq) | — | — |
Rhizobium sp. OAE497 | 0.27 | ABIE40_RS00485 | | MarR family winged helix-turn-helix transcriptional regulator | 0.12 | ABIE40_RS14425 | | hemin ABC transporter substrate-binding protein | — | — |
Sinorhizobium meliloti 1021 | 0.25 | SMc02851 | | transcriptional regulator | 0.12 | SMc01512 | | hemin binding periplasmic transmembrane protein | low | > 103 |
Variovorax sp. SCN45 | 0.24 | GFF4768 | | Transcriptional regulator, MarR family | 0.18 | GFF871 | | Vitamin B12 ABC transporter, substrate-binding protein BtuF | low | > 127 |
Agrobacterium fabrum C58 | 0.23 | Atu0109 | | transcriptional regulator, MarR family | 0.13 | Atu2460 | | ABC transporter, substrate binding protein (hemin) | low | > 89 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.22 | GFF3754 | | Transcriptional regulator, MarR family | 0.15 | GFF3984 | | Vitamin B12 ABC transporter, B12-binding component BtuF | low | > 90 |
Pseudomonas fluorescens GW456-L13 | 0.22 | PfGW456L13_3467 | | Transcriptional regulator, MarR family | 0.25 | PfGW456L13_1323 | | Vitamin B12 ABC transporter, B12-binding component BtuF | low | > 87 |
Paraburkholderia graminis OAS925 | 0.22 | ABIE53_002455 | | DNA-binding MarR family transcriptional regulator | 0.34 | ABIE53_001251 | | iron complex transport system substrate-binding protein | low | > 113 |
Pseudomonas fluorescens FW300-N2E3 | 0.22 | AO353_18435 | | MarR family transcriptional regulator | 0.25 | AO353_06665 | | iron-hydroxamate ABC transporter substrate-binding protein | low | > 101 |
Pseudomonas putida KT2440 | 0.22 | PP_4515 | | Transcriptional regulator, MarR family | 0.24 | PP_0524 | | putative Periplasmic cobalamin-binding protein HutB | low | > 96 |
Burkholderia phytofirmans PsJN | 0.21 | BPHYT_RS10020 | | MFS transporter | 0.35 | BPHYT_RS04880 | | cobalamin-binding protein | — | — |
Marinobacter adhaerens HP15 | 0.21 | HP15_3821 | | transcriptional regulator, MarR family | 0.31 | HP15_3954 | | substrate-binding periplasmic (PBP) ABC transporter protein | low | > 73 |
Pseudomonas simiae WCS417 | 0.21 | PS417_19945 | | MarR family transcriptional regulator | 0.27 | PS417_25220 | | iron-hydroxamate ABC transporter substrate-binding protein | low | > 88 |
Azospirillum brasilense Sp245 | 0.21 | AZOBR_RS02005 | | transcriptional regulator | 0.12 | AZOBR_RS29430 | | hemin ABC transporter substrate-binding protein | — | — |
Pseudomonas sp. RS175 | 0.21 | PFR28_00789 | | Transcriptional regulator SlyA | 0.21 | PFR28_03939 | | Vitamin B12-binding protein | — | — |
Pseudomonas fluorescens SBW25 | 0.21 | PFLU_RS21915 | | MarR family transcriptional regulator | 0.26 | PFLU_RS26855 | | cobalamin-binding protein | low | > 109 |
Pseudomonas fluorescens FW300-N2C3 | 0.21 | AO356_04045 | | MarR family transcriptional regulator | 0.25 | AO356_14980 | | iron-hydroxamate ABC transporter substrate-binding protein | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_2644 | | Transcriptional regulator SlyA | 0.23 | Pf6N2E2_4929 | | Vitamin B12 ABC transporter, B12-binding component BtuF | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.21 | PFLU_RS21915 | | MarR family transcriptional regulator | 0.26 | PFLU_RS26855 | | cobalamin-binding protein | low | > 109 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.20 | ABZR88_RS21095 | | MarR family winged helix-turn-helix transcriptional regulator | 0.13 | ABZR88_RS12705 | | helical backbone metal receptor | low | > 71 |
Escherichia coli Nissle 1917 | 0.20 | ECOLIN_RS09160 | | transcriptional regulator SlyA | 0.27 | ECOLIN_RS00880 | | vitamin B12 ABC transporter substrate-binding protein BtuF | — | — |
Escherichia fergusonii Becca | 0.20 | EFB2_02350 | | Transcriptional regulator SlyA | 0.27 | EFB2_03886 | | Vitamin B12-binding protein | low | > 86 |
Escherichia coli ECOR38 | 0.20 | HEPCGN_05860 | slyA | transcriptional regulator SlyA | 0.27 | HEPCGN_08220 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 87 |
Dyella japonica UNC79MFTsu3.2 | 0.20 | ABZR86_RS14780 | | MarR family transcriptional regulator | 0.13 | ABZR86_RS10435 | | cobalamin-binding protein | low | > 74 |
Escherichia coli ECRC98 | 0.19 | JDDGAC_02065 | slyA | transcriptional regulator SlyA | 0.27 | JDDGAC_13865 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 86 |
Escherichia coli ECRC62 | 0.19 | BNILDI_16785 | slyA | transcriptional regulator SlyA | 0.27 | BNILDI_09055 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 75 |
Escherichia coli BL21 | 0.19 | ECD_01612 | | global transcriptional regulator | 0.27 | ECD_00157 | | vitamin B12 ABC transporter periplasmic binding protein | — | — |
Escherichia coli ECRC102 | 0.19 | NIAGMN_00590 | slyA | transcriptional regulator SlyA | 0.27 | NIAGMN_08120 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | — | — |
Escherichia coli ECRC101 | 0.19 | MCAODC_17935 | slyA | transcriptional regulator SlyA | 0.27 | MCAODC_00785 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 87 |
Escherichia coli ECRC100 | 0.19 | OKFHMN_27475 | slyA | transcriptional regulator SlyA | 0.27 | OKFHMN_10270 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | — | — |
Escherichia coli ECOR27 | 0.19 | NOLOHH_17995 | slyA | transcriptional regulator SlyA | 0.27 | NOLOHH_02615 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.19 | OHPLBJKB_02083 | | Transcriptional regulator SlyA | 0.27 | OHPLBJKB_03504 | | Vitamin B12-binding protein | low | > 73 |
Escherichia coli ECRC99 | 0.19 | KEDOAH_00630 | slyA | transcriptional regulator SlyA | 0.27 | KEDOAH_17885 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | — | — |
Escherichia coli BW25113 | 0.19 | b1642 | slyA | transcriptional regulator for cryptic hemolysin (VIMSS) | 0.27 | b0158 | btuF | vitamin B12-transporter protein BtuF (NCBI) | low | > 76 |
Fusobacterium nucleatum SB010 | 0.19 | HUW76_01080 | | MarR family transcriptional regulator | 0.14 | HUW76_04675 | | ABC transporter substrate-binding protein | low | > 35 |
Pseudomonas sp. S08-1 | 0.18 | OH686_20685 | | Transcriptional regulator SlyA | 0.25 | OH686_15750 | | Vitamin B12 ABC transporter, substrate-binding protein BtuF | — | — |
Not shown: 6 genomes with orthologs for Sama_2069 only; 33 genomes with orthologs for Sama_2869 only