Conservation of cofitness between Sama_1923 and Sama_2069 in Shewanella amazonensis SB2B

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_1923 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 1.0 Sama_2069 MarR family transcriptional regulator (RefSeq) 0.67 7
Shewanella sp. ANA-3 0.84 Shewana3_1636 SpoVR family protein (RefSeq) 0.83 Shewana3_1739 MarR family transcriptional regulator (RefSeq) 0.59 14
Shewanella oneidensis MR-1 0.83 SO2884 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.82 SO2640 transcriptional regulator, MarR family (NCBI ptt file) 0.70 6
Shewanella loihica PV-4 0.80 Shew_1831 hypothetical protein (RefSeq) 0.78 Shew_1552 MarR family transcriptional regulator (RefSeq) — —
Escherichia coli BW25113 0.75 b1188 ycgB ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.19 b1642 slyA transcriptional regulator for cryptic hemolysin (VIMSS) low > 76
Escherichia coli ECOR27 0.75 NOLOHH_20730 ycgB SpoVR family protein 0.19 NOLOHH_17995 slyA transcriptional regulator SlyA — —
Escherichia coli ECRC62 0.75 BNILDI_18895 ycgB SpoVR family protein 0.19 BNILDI_16785 slyA transcriptional regulator SlyA — —
Escherichia coli BL21 0.75 ECD_01163 SpoVR family stationary phase protein 0.19 ECD_01612 global transcriptional regulator — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_02501 hypothetical protein 0.19 OHPLBJKB_02083 Transcriptional regulator SlyA low > 73
Escherichia coli ECRC101 0.75 OKFHMN_28285 ycgB SpoVR family protein 0.19 OKFHMN_27475 slyA transcriptional regulator SlyA — —
Escherichia fergusonii Becca 0.75 EFB2_02744 hypothetical protein 0.20 EFB2_02350 Transcriptional regulator SlyA low > 86
Escherichia coli ECRC98 0.75 JDDGAC_06225 ycgB SpoVR family protein 0.19 JDDGAC_02065 slyA transcriptional regulator SlyA — —
Escherichia coli Nissle 1917 0.75 ECOLIN_RS07180 SpoVR family protein 0.20 ECOLIN_RS09160 transcriptional regulator SlyA — —
Escherichia coli ECRC101 0.75 MCAODC_21885 ycgB SpoVR family protein 0.19 MCAODC_17935 slyA transcriptional regulator SlyA — —
Escherichia coli ECRC102 0.75 NIAGMN_27935 ycgB SpoVR family protein 0.19 NIAGMN_00590 slyA transcriptional regulator SlyA — —
Escherichia coli ECRC99 0.75 KEDOAH_25300 ycgB SpoVR family protein 0.19 KEDOAH_00630 slyA transcriptional regulator SlyA — —
Escherichia coli ECOR38 0.75 HEPCGN_24745 ycgB SpoVR family protein 0.20 HEPCGN_05860 slyA transcriptional regulator SlyA — —
Pseudomonas sp. RS175 0.72 PFR28_04070 hypothetical protein 0.21 PFR28_00789 Transcriptional regulator SlyA — —
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_14305 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.21 AO356_04045 MarR family transcriptional regulator — —
Marinobacter adhaerens HP15 0.71 HP15_2935 SpoVR family protein 0.21 HP15_3821 transcriptional regulator, MarR family low > 73
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_4799 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.21 Pf6N2E2_2644 Transcriptional regulator SlyA — —
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS27495 SpoVR family protein 0.21 PFLU_RS21915 MarR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.70 PFLU_RS27495 SpoVR family protein 0.21 PFLU_RS21915 MarR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.70 PS417_25840 SpoVR family protein 0.21 PS417_19945 MarR family transcriptional regulator low > 88
Pseudomonas sp. S08-1 0.70 OH686_15010 SpoVR-like protein 0.18 OH686_20685 Transcriptional regulator SlyA — —
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_1194 FIG004684: SpoVR-like protein 0.22 PfGW456L13_3467 Transcriptional regulator, MarR family low > 87
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_07345 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.22 AO353_18435 MarR family transcriptional regulator low > 101
Pseudomonas putida KT2440 0.68 PP_0395 putative type IV piliation protein 0.22 PP_4515 Transcriptional regulator, MarR family low > 96
Paraburkholderia graminis OAS925 0.66 ABIE53_002316 stage V sporulation protein R 0.22 ABIE53_002455 DNA-binding MarR family transcriptional regulator low > 113
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS11180 SpoVR family protein 0.21 BPHYT_RS10020 MFS transporter — —
Variovorax sp. SCN45 0.64 GFF2935 FIG004684: SpoVR-like protein 0.24 GFF4768 Transcriptional regulator, MarR family low > 127
Azospirillum brasilense Sp245 0.51 AZOBR_RS12645 SpoVR family protein 0.21 AZOBR_RS02005 transcriptional regulator — —
Phaeobacter inhibens DSM 17395 0.50 PGA1_c02490 sporulation protein R-like protein 0.26 PGA1_c26010 transcriptional regulator, MarR family low > 62
Sinorhizobium meliloti 1021 0.50 SMc01265 SpoVR family protein 0.25 SMc02851 transcriptional regulator low > 103
Rhizobium sp. OAE497 0.47 ABIE40_RS12540 SpoVR family protein 0.27 ABIE40_RS00485 MarR family winged helix-turn-helix transcriptional regulator — —

Not shown: 28 genomes with orthologs for Sama_1923 only; 10 genomes with orthologs for Sama_2069 only