Conservation of cofitness between Shew_2060 and Shew_1093 in Shewanella loihica PV-4

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2060 pyridoxal-5'-phosphate-dependent enzyme, beta subunit (RefSeq) 1.0 Shew_1093 hypothetical protein (RefSeq) 0.49 1
Shewanella amazonensis SB2B 0.81 Sama_1824 pyridoxal-5'-phosphate-dependent enzyme, beta subunit (RefSeq) 0.70 Sama_0917 hypothetical protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_05400 cysteine synthase 0.71 CSW01_11930 peroxide stress protein YaaA low > 62
Rahnella sp. WP5 0.74 EX31_RS22295 PLP-dependent cysteine synthase family protein 0.59 EX31_RS03930 peroxide stress protein YaaA low > 89
Serratia liquefaciens MT49 0.73 IAI46_05060 PLP-dependent cysteine synthase family protein 0.65 IAI46_03045 peroxide stress protein YaaA low > 86
Pectobacterium carotovorum WPP14 0.72 HER17_RS15810 PLP-dependent cysteine synthase family protein 0.63 HER17_RS02810 peroxide stress protein YaaA low > 75
Dickeya dadantii 3937 0.72 DDA3937_RS05675 PLP-dependent cysteine synthase family protein 0.64 DDA3937_RS18400 peroxide stress protein YaaA low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS05720 PLP-dependent cysteine synthase family protein 0.65 HGI48_RS18330 peroxide stress protein YaaA low > 71
Klebsiella michiganensis M5al 0.71 BWI76_RS06575 cysteine synthase 0.63 BWI76_RS04260 peroxide stress protein YaaA low > 92
Enterobacter asburiae PDN3 0.71 EX28DRAFT_2523 Cysteine synthase 0.61 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria low > 76
Dickeya dianthicola ME23 0.71 DZA65_RS06045 PLP-dependent cysteine synthase family protein 0.65 DZA65_RS19470 peroxide stress protein YaaA low > 75
Enterobacter sp. TBS_079 0.71 MPMX20_01038 N-(2-amino-2-carboxyethyl)-L-glutamate synthase 0.61 MPMX20_00714 Peroxide stress resistance protein YaaA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF4363 Cysteine synthase B (EC 2.5.1.47) 0.61 GFF1081 UPF0246 protein YaaA low > 78
Pantoea sp. MT58 0.67 IAI47_14605 PLP-dependent cysteine synthase family protein 0.63 IAI47_16200 peroxide stress protein YaaA low > 76
Variovorax sp. OAS795 0.65 ABID97_RS20355 PLP-dependent cysteine synthase family protein 0.45 ABID97_RS07905 peroxide stress protein YaaA low > 91
Variovorax sp. SCN45 0.65 GFF4782 Pyridoxal-5'-phosphate-dependent enzyme beta superfamily (fold type II) 0.46 GFF6020 UPF0246 protein YaaA low > 127
Acidovorax sp. GW101-3H11 0.65 Ac3H11_1429 Cysteine synthase B (EC 2.5.1.47) 0.48 Ac3H11_1593 UPF0246 protein YaaA low > 79
Alteromonas macleodii MIT1002 0.63 MIT1002_01201 Cysteine synthase 0.63 MIT1002_03077 hypothetical protein low > 70
Dinoroseobacter shibae DFL-12 0.62 Dshi_2951 Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq) 0.44 Dshi_3333 protein of unknown function DUF328 (RefSeq) low > 64
Pseudomonas sp. S08-1 0.60 OH686_04720 Pyridoxal-5'-phosphate-dependent enzyme beta superfamily (fold type II) 0.57 OH686_07085 UPF0246 protein YaaA low > 80
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS14525 cysteine synthase 0.51 RR42_RS05780 hypothetical protein low > 128
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_4616 Cysteine synthase (EC 2.5.1.47) 0.60 PfGW456L13_1686 UPF0246 protein YaaA low > 87
Pseudomonas fluorescens SBW25 0.59 PFLU_RS06580 PLP-dependent cysteine synthase family protein 0.57 PFLU_RS04920 peroxide stress protein YaaA low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS06580 PLP-dependent cysteine synthase family protein 0.57 PFLU_RS04920 peroxide stress protein YaaA low > 109
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_3203 Cysteine synthase (EC 2.5.1.47) 0.60 Pf1N1B4_981 UPF0246 protein YaaA low > 87
Pseudomonas sp. RS175 0.57 PFR28_00527 N-(2-amino-2-carboxyethyl)-L-glutamate synthase 0.60 PFR28_03554 Peroxide stress resistance protein YaaA 0.19 62
Pseudomonas simiae WCS417 0.57 PS417_06550 cysteine synthase 0.58 PS417_04850 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_2936 Cysteine synthase (EC 2.5.1.47) 0.59 Pf6N2E2_5389 UPF0246 protein YaaA low > 103
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_17060 cysteine synthase 0.60 AO353_04675 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_05385 cysteine synthase 0.60 AO356_17320 hypothetical protein low > 104

Not shown: 7 genomes with orthologs for Shew_2060 only; 45 genomes with orthologs for Shew_1093 only