Conservation of cofitness between BT3253 and BT3320 in Bacteroides thetaiotaomicron VPI-5482

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT3253 phosphoribosylamine--glycine ligase (NCBI ptt file) 1.0 BT3320 dihydrodipicolinate reductase (NCBI ptt file) 0.73 12
Bacteroides ovatus ATCC 8483 0.97 BACOVA_01348 phosphoribosylamine--glycine ligase 0.91 BACOVA_00959 dihydrodipicolinate reductase 0.73 73
Bacteroides stercoris CC31F 0.84 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase 0.85 HMPREF1181_RS02275 4-hydroxy-tetrahydrodipicolinate reductase low > 56
Phocaeicola vulgatus CL09T03C04 0.80 HMPREF1058_RS10995 phosphoribosylamine--glycine ligase 0.86 HMPREF1058_RS11730 4-hydroxy-tetrahydrodipicolinate reductase 0.65 20
Phocaeicola dorei CL03T12C01 0.79 ABI39_RS06055 phosphoribosylamine--glycine ligase 0.86 ABI39_RS05175 4-hydroxy-tetrahydrodipicolinate reductase low > 72
Parabacteroides merdae CL09T00C40 0.76 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase 0.60 HMPREF1078_RS05545 4-hydroxy-tetrahydrodipicolinate reductase 0.90 53
Mucilaginibacter yixingensis YX-36 DSM 26809 0.60 ABZR88_RS01620 phosphoribosylamine--glycine ligase 0.44 ABZR88_RS02050 4-hydroxy-tetrahydrodipicolinate reductase — —
Pedobacter sp. GW460-11-11-14-LB5 0.58 CA265_RS22605 phosphoribosylamine--glycine ligase 0.45 CA265_RS15670 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) (from data) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.55 Echvi_0167 phosphoribosylamine--glycine ligase 0.37 Echvi_2395 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) (from data) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.55 CA264_20115 phosphoribosylamine--glycine ligase 0.36 CA264_04750 4-hydroxy-tetrahydrodipicolinate reductase — —
Dickeya dadantii 3937 0.45 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.16 DDA3937_RS18315 4-hydroxy-tetrahydrodipicolinate reductase — —
Dickeya dianthicola ME23 0.45 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.16 DZA65_RS19390 4-hydroxy-tetrahydrodipicolinate reductase — —
Pseudomonas sp. S08-1 0.45 OH686_07625 Phosphoribosylamine--glycine ligase 0.18 OH686_17070 4-hydroxy-tetrahydrodipicolinate reductase — —
Dickeya dianthicola 67-19 0.45 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.16 HGI48_RS18250 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECOR27 0.44 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 0.15 NOLOHH_03285 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia fergusonii Becca 0.44 EFB2_04605 Phosphoribosylamine--glycine ligase 0.16 EFB2_04014 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC62 0.44 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 0.16 BNILDI_08315 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli Nissle 1917 0.44 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.16 ECOLIN_RS00160 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli BL21 0.44 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 0.15 ECD_00035 dihydrodipicolinate reductase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 0.15 OHPLBJKB_03626 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECOR38 0.44 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.16 HEPCGN_08940 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC98 0.44 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 0.16 JDDGAC_14550 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC102 0.44 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 0.16 NIAGMN_08805 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC99 0.44 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 0.16 KEDOAH_17200 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC101 0.44 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 0.16 OKFHMN_10955 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC101 0.44 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 0.16 MCAODC_01470 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli BW25113 0.44 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 0.16 b0031 dapB dihydrodipicolinate reductase (NCBI) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.16 GFF216 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) — —
Enterobacter sp. TBS_079 0.44 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.15 MPMX20_00738 4-hydroxy-tetrahydrodipicolinate reductase — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS02550 phosphoribosylamine--glycine ligase 0.16 ABCV34_RS07485 4-hydroxy-tetrahydrodipicolinate reductase — —
Shewanella sp. ANA-3 0.42 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.13 Shewana3_0966 dihydrodipicolinate reductase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.12 B158DRAFT_0614 dihydrodipicolinate reductase (EC 1.3.1.26) — —
Shewanella oneidensis MR-1 0.41 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.13 SO_1140 dapB dihydrodipicolinate reductase (RefSeq) — —
Rhizobium sp. OAE497 0.41 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.14 ABIE40_RS13905 4-hydroxy-tetrahydrodipicolinate reductase low > 107
Dechlorosoma suillum PS 0.41 Dsui_1596 phosphoribosylamine--glycine ligase 0.17 Dsui_3066 dihydrodipicolinate reductase — —
Magnetospirillum magneticum AMB-1 0.39 AMB_RS01075 phosphoribosylamine--glycine ligase 0.17 AMB_RS22745 4-hydroxy-tetrahydrodipicolinate reductase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS09255 phosphoribosylamine--glycine ligase 0.15 A4249_RS13645 4-hydroxy-tetrahydrodipicolinate reductase — —
Caulobacter crescentus NA1000 0.38 CCNA_00299 phosphoribosylamine--glycine ligase 0.16 CCNA_03664 dihydrodipicolinate reductase — —
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_00299 phosphoribosylamine--glycine ligase 0.16 CCNA_03664 dihydrodipicolinate reductase — —
Bifidobacterium breve UCC2003 0.31 BBR_RS13370 phosphoribosylamine--glycine ligase 0.15 BBR_RS12990 4-hydroxy-tetrahydrodipicolinate reductase low > 34
Mycobacterium tuberculosis H37Rv 0.28 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) 0.16 Rv2773c Dihydrodipicolinate reductase DapB (DHPR) — —
Methanococcus maripaludis JJ 0.21 MMJJ_RS03210 phosphoribosylamine--glycine ligase 0.18 MMJJ_RS00345 4-hydroxy-tetrahydrodipicolinate reductase — —
Methanococcus maripaludis S2 0.21 MMP_RS02095 phosphoribosylamine--glycine ligase 0.18 MMP_RS04790 4-hydroxy-tetrahydrodipicolinate reductase — —

Not shown: 61 genomes with orthologs for BT3253 only; 0 genomes with orthologs for BT3320 only