Conservation of cofitness between BT1374 and BT2403 in Bacteroides thetaiotaomicron VPI-5482

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT1374 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) 1.0 BT2403 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) 0.74 15
Bacteroides ovatus ATCC 8483 0.97 BACOVA_00215 diaminopimelate decarboxylase 0.93 BACOVA_03021 homoserine dehydrogenase 0.95 19
Bacteroides stercoris CC31F 0.88 HMPREF1181_RS11050 diaminopimelate decarboxylase 0.87 HMPREF1181_RS00060 bifunctional aspartate kinase/homoserine dehydrogenase I 0.98 1
Phocaeicola vulgatus CL09T03C04 0.85 HMPREF1058_RS06195 diaminopimelate decarboxylase 0.84 HMPREF1058_RS14720 bifunctional aspartate kinase/homoserine dehydrogenase I low > 67
Phocaeicola dorei CL03T12C01 0.84 ABI39_RS19950 diaminopimelate decarboxylase 0.83 ABI39_RS10430 bifunctional aspartate kinase/homoserine dehydrogenase I 0.67 16
Parabacteroides merdae CL09T00C40 0.67 HMPREF1078_RS13545 diaminopimelate decarboxylase 0.71 HMPREF1078_RS10385 bifunctional aspartate kinase/homoserine dehydrogenase I 0.96 22
Mucilaginibacter yixingensis YX-36 DSM 26809 0.54 ABZR88_RS10180 diaminopimelate decarboxylase 0.42 ABZR88_RS18950 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Pedobacter sp. GW460-11-11-14-LB5 0.54 CA265_RS09650 diaminopimelate decarboxylase 0.40 CA265_RS23475 aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) 0.89 8
Alteromonas macleodii MIT1002 0.36 MIT1002_00160 Diaminopimelate decarboxylase 0.30 MIT1002_03086 Aspartokinase I/homoserine dehydrogenase I 0.84 20
Shewanella loihica PV-4 0.35 Shew_0322 diaminopimelate decarboxylase (RefSeq) 0.30 Shew_1079 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) 0.98 5
Shewanella oneidensis MR-1 0.35 SO4309 lysA diaminopimelate decarboxylase (NCBI ptt file) 0.31 SO3415 thrA aspartokinase I/homoserine dehydrogenase, threonine-sensitive (NCBI ptt file) 0.87 69
Shewanella sp. ANA-3 0.35 Shewana3_0390 diaminopimelate decarboxylase (RefSeq) 0.31 Shewana3_1139 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) 0.95 25
Lysobacter sp. OAE881 0.35 ABIE51_RS13675 diaminopimelate decarboxylase 0.28 ABIE51_RS17520 bifunctional aspartate kinase/homoserine dehydrogenase I low > 62
Shewanella amazonensis SB2B 0.34 Sama_3250 diaminopimelate decarboxylase (RefSeq) 0.28 Sama_0905 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) 0.93 45
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_00635 diaminopimelate decarboxylase 0.30 CSW01_11975 bifunctional aspartate kinase/homoserine dehydrogenase I low > 62
Echinicola vietnamensis KMM 6221, DSM 17526 0.22 Echvi_1295 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) 0.43 Echvi_2000 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) 0.94 1
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_0272 pyridoxal-dependent decarboxylase, exosortase A system-associated 0.18 B158DRAFT_2460 aspartate kinase (EC 2.7.2.4) — —
Enterobacter sp. TBS_079 0.19 MPMX20_03705 Diaminopimelate decarboxylase 0.28 MPMX20_00710 Bifunctional aspartokinase/homoserine dehydrogenase 1 0.85 19
Enterobacter asburiae PDN3 0.19 EX28DRAFT_2916 diaminopimelate decarboxylase 0.28 EX28DRAFT_3614 aspartate kinase (EC 2.7.2.4) 0.89 11
Escherichia fergusonii Becca 0.19 EFB2_01045 Diaminopimelate decarboxylase 0.29 EFB2_04041 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 86
Escherichia coli Nissle 1917 0.19 ECOLIN_RS15930 diaminopimelate decarboxylase 0.29 ECOLIN_RS00010 bifunctional aspartate kinase/homoserine dehydrogenase I 0.51 12
Escherichia coli ECRC99 0.19 KEDOAH_08185 lysA diaminopimelate decarboxylase 0.29 KEDOAH_17045 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Erwinia tracheiphila SCR3 0.19 LU632_RS06040 lysA diaminopimelate decarboxylase 0.30 LU632_RS02610 thrA bifunctional aspartate kinase/homoserine dehydrogenase I 0.86 3
Escherichia coli ECOR38 0.19 HEPCGN_19565 lysA diaminopimelate decarboxylase 0.29 HEPCGN_09115 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 85
Escherichia coli ECRC62 0.19 BNILDI_10310 lysA diaminopimelate decarboxylase 0.29 BNILDI_08160 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia coli ECRC98 0.19 JDDGAC_23610 lysA diaminopimelate decarboxylase 0.29 JDDGAC_14705 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia coli BW25113 0.19 b2838 lysA diaminopimelate decarboxylase, PLP-binding (NCBI) 0.29 b0002 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI) 0.93 7
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_00891 Diaminopimelate decarboxylase 0.29 OHPLBJKB_03658 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 73
Escherichia coli BL21 0.19 ECD_02686 diaminopimelate decarboxylase, PLP-binding 0.29 ECD_00002 Bifunctional aspartokinase/homoserine dehydrogenase 1 0.85 3
Escherichia coli ECRC101 0.19 OKFHMN_19945 lysA diaminopimelate decarboxylase 0.29 OKFHMN_11110 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia coli ECRC102 0.19 NIAGMN_17715 lysA diaminopimelate decarboxylase 0.29 NIAGMN_08960 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia coli ECOR27 0.19 NOLOHH_11830 lysA diaminopimelate decarboxylase 0.29 NOLOHH_03440 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 57
Escherichia coli ECRC101 0.19 MCAODC_10470 lysA diaminopimelate decarboxylase 0.29 MCAODC_01625 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Dickeya dianthicola ME23 0.19 DZA65_RS00505 type III PLP-dependent enzyme 0.30 DZA65_RS19485 bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Dickeya dianthicola 67-19 0.19 HGI48_RS00505 type III PLP-dependent enzyme 0.30 HGI48_RS18345 bifunctional aspartate kinase/homoserine dehydrogenase I low > 71
Dickeya dadantii 3937 0.19 DDA3937_RS20740 type III PLP-dependent enzyme 0.30 DDA3937_RS18415 bifunctional aspartate kinase/homoserine dehydrogenase I low > 74
Rahnella sp. WP5 0.18 EX31_RS02420 type III PLP-dependent enzyme 0.31 EX31_RS03945 bifunctional aspartate kinase/homoserine dehydrogenase I low > 89
Klebsiella michiganensis M5al 0.18 BWI76_RS23360 diaminopimelate decarboxylase 0.29 BWI76_RS04245 bifunctional aspartate kinase/homoserine dehydrogenase I 0.81 16
Serratia liquefaciens MT49 0.18 IAI46_20520 diaminopimelate decarboxylase 0.29 IAI46_03030 bifunctional aspartate kinase/homoserine dehydrogenase I 0.71 7
Pectobacterium carotovorum WPP14 0.18 HER17_RS03710 diaminopimelate decarboxylase 0.29 HER17_RS02795 bifunctional aspartate kinase/homoserine dehydrogenase I 0.92 37
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF1323 Diaminopimelate decarboxylase (EC 4.1.1.20) 0.29 GFF1078 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) low > 78
Pantoea sp. MT58 0.17 IAI47_03860 diaminopimelate decarboxylase 0.29 IAI47_16215 bifunctional aspartate kinase/homoserine dehydrogenase I 0.97 3

Not shown: 58 genomes with orthologs for BT1374 only; 1 genomes with orthologs for BT2403 only