Conservation of cofitness between SO2865 and SO1020 in Shewanella oneidensis MR-1

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2865 L-lysine exporter, putative (NCBI ptt file) 1.0 SO1020 nuoB NADH dehydrogenase I, B subunit (NCBI ptt file) 0.32 11
Acinetobacter baumannii LAC-4 0.46 RR41_RS09260 LysE/ArgO family amino acid transporter 0.72 RR41_RS15505 NADH-quinone oxidoreductase subunit B — —
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1780 Transporter, LysE family 0.85 PfGW456L13_2632 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) low > 87
Pseudomonas sp. DMC3 0.41 GFF5061 Arginine exporter protein ArgO 0.84 GFF1511 NADH-quinone oxidoreductase subunit B low > 89
Pseudomonas putida KT2440 0.41 PP_0916 Amino acid transporter LysE 0.82 PP_4120 NADH-quinone oxidoreductase subunit B low > 96
Pseudomonas sp. BP01 0.41 JOY50_RS14220 LysE/ArgO family amino acid transporter 0.82 JOY50_RS06970 NADH-quinone oxidoreductase subunit B family protein low > 84
Pseudomonas simiae WCS417 0.41 PS417_22175 amino acid transporter LysE 0.84 PS417_16580 NADH dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_710 Transporter, LysE family 0.84 Pf1N1B4_4040 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) low > 87
Pseudomonas orientalis W4I3 0.40 QF045_RS24310 LysE/ArgO family amino acid transporter 0.84 QF045_RS18345 NADH-quinone oxidoreductase subunit B low > 93
Pseudomonas sp. RS175 0.40 PFR28_00607 Arginine exporter protein ArgO 0.84 PFR28_02628 NADH-quinone oxidoreductase subunit B — —
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_03925 lysine transporter LysE 0.84 AO353_27745 NADH dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS23800 amino acid transporter 0.84 PFLU_RS18620 NADH-quinone oxidoreductase subunit B low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS23800 amino acid transporter 0.84 PFLU_RS18620 NADH-quinone oxidoreductase subunit B low > 109
Pseudomonas sp. SVBP6 0.39 COO64_RS12095 LysE/ArgO family amino acid transporter 0.83 COO64_RS24275 NADH-quinone oxidoreductase subunit B low > 93
Acinetobacter radioresistens SK82 0.39 MPMX26_00290 Arginine exporter protein ArgO 0.69 MPMX26_02554 NADH-quinone oxidoreductase subunit B — —
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_05000 lysine transporter LysE 0.84 AO356_22065 NADH dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2850 Transporter, LysE family 0.84 Pf6N2E2_276 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4058 Lysine exporter protein (LYSE/YGGA) 0.84 Psyr_3198 NADH dehydrogenase subunit B — —
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4058 Lysine exporter protein (LYSE/YGGA) 0.84 Psyr_3198 NADH dehydrogenase subunit B low > 86
Pseudomonas segetis P6 0.38 MPMX49_03760 Arginine exporter protein ArgO 0.83 MPMX49_02561 NADH-quinone oxidoreductase subunit B low > 75
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2969 L-lysine exporter 0.82 EX28DRAFT_0322 NADH-quinone oxidoreductase, B subunit low > 76
Enterobacter sp. TBS_079 0.36 MPMX20_03775 Arginine exporter protein ArgO 0.82 MPMX20_03217 NADH-quinone oxidoreductase subunit B low > 85
Klebsiella michiganensis M5al 0.35 BWI76_RS23965 arginine exporter protein 0.82 BWI76_RS20185 NADH-quinone oxidoreductase subunit B — —
Rahnella sp. WP5 0.35 EX31_RS21440 arginine exporter ArgO 0.82 EX31_RS19430 NADH-quinone oxidoreductase subunit B low > 89
Pectobacterium carotovorum WPP14 0.35 HER17_RS02705 arginine exporter ArgO 0.82 HER17_RS07130 NADH-quinone oxidoreductase subunit B low > 75
Klebsiella pneumoniae MKP103 0.35 KDGMDA_04440 arginine exporter ArgO 0.82 KDGMDA_27065 NADH-quinone oxidoreductase subunit NuoB low > 95
Pseudomonas sp. S08-1 0.35 OH686_07205 Arginine exporter protein ArgO 0.83 OH686_00150 NADH-ubiquinone oxidoreductase chain B low > 80
Escherichia coli ECOR38 0.34 HEPCGN_18715 argO arginine exporter ArgO 0.80 HEPCGN_22050 nuoB NADH-quinone oxidoreductase subunit NuoB low > 88
Escherichia coli Nissle 1917 0.34 ECOLIN_RS16245 arginine exporter ArgO 0.80 ECOLIN_RS13280 NADH-quinone oxidoreductase subunit NuoB low > 55
Escherichia fergusonii Becca 0.34 EFB2_00983 Arginine exporter protein ArgO 0.80 EFB2_01572 NADH-quinone oxidoreductase subunit B low > 86
Escherichia coli ECOR27 0.34 NOLOHH_11320 argO arginine exporter ArgO 0.80 NOLOHH_14465 nuoB NADH-quinone oxidoreductase subunit NuoB low > 76
Escherichia coli ECRC102 0.34 NIAGMN_17175 argO arginine exporter ArgO 0.80 NIAGMN_20615 nuoB NADH-quinone oxidoreductase subunit NuoB low > 80
Escherichia coli ECRC98 0.34 JDDGAC_23040 argO arginine exporter ArgO 0.80 JDDGAC_26810 nuoB NADH-quinone oxidoreductase subunit NuoB low > 87
Escherichia coli ECRC100 0.34 OKFHMN_19410 argO arginine exporter ArgO 0.80 OKFHMN_22845 nuoB NADH-quinone oxidoreductase subunit NuoB low > 79
Escherichia coli ECRC101 0.34 MCAODC_09930 argO arginine exporter ArgO 0.80 MCAODC_13885 nuoB NADH-quinone oxidoreductase subunit NuoB low > 87
Escherichia coli ECRC99 0.34 KEDOAH_08730 argO arginine exporter ArgO 0.80 KEDOAH_05350 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3018 Arginine exporter protein ArgO 0.80 GFF1890 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) low > 78
Escherichia coli BL21 0.33 ECD_02754 arginine transporter 0.80 ECD_02212 NADH:ubiquinone oxidoreductase, chain B low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00793 Arginine exporter protein ArgO 0.80 OHPLBJKB_01419 NADH-quinone oxidoreductase subunit B low > 74
Serratia liquefaciens MT49 0.33 IAI46_20920 arginine exporter ArgO 0.82 IAI46_17705 NADH-quinone oxidoreductase subunit B low > 87
Pantoea sp. MT58 0.33 IAI47_03705 arginine exporter ArgO 0.83 IAI47_06365 NADH-quinone oxidoreductase subunit B low > 76
Escherichia coli BW25113 0.33 b2923 argO arginine exporter protein (NCBI) 0.80 b2287 nuoB NADH dehydrogenase subunit B (NCBI) low > 76
Escherichia coli ECRC62 0.33 BNILDI_09855 argO arginine exporter ArgO 0.80 BNILDI_13385 nuoB NADH-quinone oxidoreductase subunit NuoB low > 75
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS15995 arginine exporter ArgO 0.83 PagCFBP13505_RS00340 NADH-quinone oxidoreductase subunit B low > 74
Dickeya dianthicola ME23 0.32 DZA65_RS02210 amino acid transporter 0.82 DZA65_RS14980 NADH-quinone oxidoreductase subunit B — —
Dickeya dianthicola 67-19 0.31 HGI48_RS02085 amino acid transporter 0.82 HGI48_RS14305 NADH-quinone oxidoreductase subunit B low > 71
Dickeya dadantii 3937 0.31 DDA3937_RS02115 amino acid transporter 0.83 DDA3937_RS14330 NADH-quinone oxidoreductase subunit B — —
Pseudomonas aeruginosa PA14 0.30 IKLFDK_02275 lysine transporter LysE 0.83 IKLFDK_13245 NADH-quinone oxidoreductase subunit B 0.31 65
Pseudomonas aeruginosa MRSN321 0.30 DY961_RS24665 LysE/ArgO family amino acid transporter 0.83 DY961_RS04025 NADH-quinone oxidoreductase subunit B low > 100
Pseudomonas aeruginosa PUPa3 0.30 DQ20_RS57115 LysE/ArgO family amino acid transporter 0.83 DQ20_RS35055 NADH-quinone oxidoreductase subunit B low > 101
Erwinia amylovora T8 0.30 OLJFJH_08670 arginine exporter ArgO 0.80 OLJFJH_11415 NADH-quinone oxidoreductase subunit B low > 58
Erwinia tracheiphila SCR3 0.25 LU632_RS05560 LysE family transporter 0.81 LU632_RS07970 NADH-quinone oxidoreductase subunit B low > 73
Erwinia tracheiphila HP pepo 2.2 0.22 IJEDHG_03345 lysE arginine transporter 0.81 IJEDHG_18050 nuoB NADH-quinone oxidoreductase subunit B low > 61
Pseudomonas lactucae CFBP13502 0.19 GEMAOFIL_05458 Arginine exporter protein ArgO 0.84 GEMAOFIL_03643 NADH-quinone oxidoreductase subunit B low > 96

Not shown: 35 genomes with orthologs for SO2865 only; 2 genomes with orthologs for SO1020 only