Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BW25113 | 1.0 | b3867 | hemN | O2-independent coproporphyrinogen III oxidase (VIMSS) | 1.0 | b3631 | rfaG | glucosyltransferase I (NCBI) | 0.49 | 4 |
Escherichia coli ECOR27 | 1.00 | NOLOHH_06250 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.91 | NOLOHH_07535 | rfaG | Lipopolysaccharide core biosynthesis protein RfaG | 0.68 | 40 |
Escherichia coli BL21 | 1.00 | ECD_03752 | | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent | 0.91 | ECD_03488 | | UDP-glucose:(heptosyl)lipopolysaccharide alpha-1,3-glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I | low | > 61 |
Escherichia coli ECRC101 | 1.00 | MCAODC_04620 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.91 | MCAODC_06165 | rfaG | Lipopolysaccharide core biosynthesis protein RfaG | low | > 87 |
Escherichia coli ECRC99 | 1.00 | KEDOAH_14030 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.91 | KEDOAH_12495 | rfaG | Lipopolysaccharide core biosynthesis protein RfaG | — | — |
Escherichia coli ECRC102 | 1.00 | NIAGMN_11875 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.91 | NIAGMN_13415 | rfaG | Lipopolysaccharide core biosynthesis protein RfaG | — | — |
Escherichia coli ECRC100 | 1.00 | OKFHMN_14120 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.91 | OKFHMN_15655 | rfaG | Lipopolysaccharide core biosynthesis protein RfaG | low | > 80 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_04186 | | Oxygen-independent coproporphyrinogen III oxidase | 0.90 | OHPLBJKB_00071 | | Lipopolysaccharide core biosynthesis protein RfaG | low | > 73 |
Escherichia coli ECRC98 | 1.00 | JDDGAC_17745 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.91 | JDDGAC_19280 | rfaG | Lipopolysaccharide core biosynthesis protein RfaG | low | > 86 |
Escherichia coli ECRC62 | 1.00 | BNILDI_05280 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.91 | BNILDI_03980 | rfaG | Lipopolysaccharide core biosynthesis protein RfaG | low | > 75 |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS22285 | | oxygen-independent coproporphyrinogen III oxidase | 0.91 | ECOLIN_RS20695 | | glycosyltransferase family 4 protein | low | > 55 |
Escherichia coli ECOR38 | 0.99 | HEPCGN_12755 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.91 | HEPCGN_14480 | rfaG | Lipopolysaccharide core biosynthesis protein RfaG | low | > 87 |
Escherichia fergusonii Becca | 0.99 | EFB2_04750 | | Oxygen-independent coproporphyrinogen III oxidase | 0.91 | EFB2_00182 | | Lipopolysaccharide core biosynthesis protein RfaG | 0.36 | 68 |
Enterobacter asburiae PDN3 | 0.93 | EX28DRAFT_4348 | | oxygen-independent coproporphyrinogen III oxidase | 0.12 | EX28DRAFT_3879 | | Glycosyltransferase | low | > 76 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF2219 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | 0.87 | GFF380 | | UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) | low | > 78 |
Enterobacter sp. TBS_079 | 0.93 | MPMX20_04598 | | Oxygen-independent coproporphyrinogen III oxidase | 0.12 | MPMX20_00106 | | Lipopolysaccharide core biosynthesis protein RfaG | low | > 85 |
Klebsiella michiganensis M5al | 0.90 | BWI76_RS00380 | | oxygen-independent coproporphyrinogen III oxidase | 0.12 | BWI76_RS27300 | | glucuronic acid transferase | — | — |
Serratia liquefaciens MT49 | 0.82 | IAI46_24970 | | oxygen-independent coproporphyrinogen III oxidase | 0.11 | IAI46_24780 | | glycosyltransferase family 4 protein | — | — |
Dickeya dianthicola ME23 | 0.80 | DZA65_RS22220 | | oxygen-independent coproporphyrinogen III oxidase | 0.13 | DZA65_RS00805 | | glycosyltransferase family 4 protein | — | — |
Dickeya dianthicola 67-19 | 0.79 | HGI48_RS21245 | | oxygen-independent coproporphyrinogen III oxidase | 0.13 | HGI48_RS00750 | | glycosyltransferase family 4 protein | — | — |
Dickeya dadantii 3937 | 0.79 | DDA3937_RS00120 | | oxygen-independent coproporphyrinogen III oxidase | 0.14 | DDA3937_RS20460 | | glycosyltransferase family 4 protein | — | — |
Rahnella sp. WP5 | 0.79 | EX31_RS15885 | | oxygen-independent coproporphyrinogen III oxidase | 0.14 | EX31_RS14435 | | glycosyltransferase family 4 protein | low | > 89 |
Pantoea sp. MT58 | 0.76 | IAI47_00445 | | oxygen-independent coproporphyrinogen III oxidase | 0.12 | IAI47_00655 | | glycosyltransferase family 4 protein | low | > 76 |
Erwinia tracheiphila SCR3 | 0.70 | LU632_RS22115 | hemN | oxygen-independent coproporphyrinogen III oxidase | 0.14 | LU632_RS21955 | | glycosyltransferase family 4 protein | low | > 74 |
Pseudomonas fluorescens GW456-L13 | 0.49 | PfGW456L13_4070 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | 0.51 | PfGW456L13_210 | | UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) | — | — |
Pseudomonas sp. RS175 | 0.49 | PFR28_01080 | | Oxygen-independent coproporphyrinogen III oxidase | 0.52 | PFR28_05065 | | Lipopolysaccharide core biosynthesis protein RfaG | — | — |
Pseudomonas simiae WCS417 | 0.49 | PS417_20775 | | coproporphyrinogen III oxidase | 0.52 | PS417_02240 | | glucosyltransferase I RfaG | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS22385 | | oxygen-independent coproporphyrinogen III oxidase | 0.52 | PFLU_RS02295 | | glycosyltransferase family 4 protein | — | — |
Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS22385 | | oxygen-independent coproporphyrinogen III oxidase | 0.52 | PFLU_RS02295 | | glycosyltransferase family 4 protein | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_3868 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | 0.51 | Pf1N1B4_1471 | | UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) | — | — |
Pseudomonas sp. S08-1 | 0.48 | OH686_02235 | | oxygen-independent coproporphyrinogen III oxidase | 0.48 | OH686_09680 | | UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG | — | — |
Pseudomonas putida KT2440 | 0.48 | PP_4264 | | oxygen-independent coproporphyrinogen III dehydrogenase | 0.51 | PP_0343 | | lipopolysaccharide glucosyltransferase I | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_3423 | | coproporphyrinogen III oxidase, anaerobic | 0.52 | Psyr_0522 | | Glycosyl transferase, group 1 | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_00655 | | coproporphyrinogen III oxidase | 0.51 | AO353_12885 | | glucosyltransferase I RfaG | — | — |
Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_3423 | | coproporphyrinogen III oxidase, anaerobic | 0.52 | Psyr_0522 | | Glycosyl transferase, group 1 | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_2321 | | Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | 0.51 | Pf6N2E2_3669 | | UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_02480 | | coproporphyrinogen III oxidase | 0.51 | AO356_08940 | | glucosyltransferase I RfaG | — | — |
Pseudomonas stutzeri RCH2 | 0.47 | Psest_2537 | | oxygen-independent coproporphyrinogen III oxidase | 0.51 | Psest_0453 | | Glycosyltransferase | — | — |
Dechlorosoma suillum PS | 0.46 | Dsui_1647 | | oxygen-independent coproporphyrinogen III oxidase | 0.14 | Dsui_0468 | | glycosyltransferase | — | — |
Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS06465 | | oxygen-independent coproporphyrinogen III oxidase | 0.10 | ABCV34_RS02455 | | glycosyltransferase family 4 protein | low | > 48 |
Rhodopseudomonas palustris CGA009 | 0.33 | TX73_008565 | | oxygen-independent coproporphyrinogen III oxidase | 0.31 | TX73_013095 | | glycosyltransferase family 4 protein | — | — |