Conservation of cofitness between b2913 and b3172 in Escherichia coli BW25113

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 1.0 b3172 argG argininosuccinate synthase (NCBI) 0.91 7
Escherichia coli ECRC98 1.00 JDDGAC_23100 serA phosphoglycerate dehydrogenase 1.00 JDDGAC_21715 argG argininosuccinate synthase — —
Escherichia coli ECRC101 1.00 MCAODC_09980 serA phosphoglycerate dehydrogenase 1.00 MCAODC_08610 argG argininosuccinate synthase — —
Escherichia coli ECOR27 1.00 NOLOHH_11370 serA phosphoglycerate dehydrogenase 1.00 NOLOHH_09890 argG argininosuccinate synthase low > 57
Escherichia coli Nissle 1917 1.00 ECOLIN_RS16210 phosphoglycerate dehydrogenase 1.00 ECOLIN_RS18275 argininosuccinate synthase low > 52
Escherichia coli ECRC101 1.00 OKFHMN_19460 serA phosphoglycerate dehydrogenase 1.00 OKFHMN_18090 argG argininosuccinate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 1.00 OHPLBJKB_00528 Argininosuccinate synthase low > 73
Escherichia coli BL21 1.00 ECD_02744 D-3-phosphoglycerate dehydrogenase 1.00 ECD_03038 argininosuccinate synthetase 0.87 2
Escherichia coli ECRC99 1.00 KEDOAH_08680 serA phosphoglycerate dehydrogenase 1.00 KEDOAH_10060 argG argininosuccinate synthase — —
Escherichia coli ECRC102 1.00 NIAGMN_17225 serA phosphoglycerate dehydrogenase 1.00 NIAGMN_15850 argG argininosuccinate synthase — —
Escherichia coli ECOR38 1.00 HEPCGN_18760 serA phosphoglycerate dehydrogenase 1.00 HEPCGN_16965 argG argininosuccinate synthase low > 85
Escherichia coli ECRC62 1.00 BNILDI_09905 serA phosphoglycerate dehydrogenase 1.00 BNILDI_01645 argG argininosuccinate synthase — —
Escherichia fergusonii Becca 1.00 EFB2_00990 D-3-phosphoglycerate dehydrogenase 1.00 EFB2_00651 Argininosuccinate synthase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.97 GFF2913 Argininosuccinate synthase (EC 6.3.4.5) low > 78
Enterobacter sp. TBS_079 0.93 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.95 MPMX20_04077 Argininosuccinate synthase 0.89 17
Klebsiella michiganensis M5al 0.93 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.95 BWI76_RS25115 argininosuccinate synthase 0.83 12
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.95 EX28DRAFT_3224 argininosuccinate synthase (EC 6.3.4.5) — —
Erwinia tracheiphila SCR3 0.86 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.16 LU632_RS19605 argininosuccinate synthase low > 74
Pectobacterium carotovorum WPP14 0.85 HER17_RS02725 phosphoglycerate dehydrogenase 0.93 HER17_RS21055 argininosuccinate synthase 0.76 64
Serratia liquefaciens MT49 0.85 IAI46_20900 phosphoglycerate dehydrogenase 0.15 IAI46_24505 argininosuccinate synthase 0.77 21
Dickeya dadantii 3937 0.83 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.92 DDA3937_RS20890 argininosuccinate synthase 0.74 54
Rahnella sp. WP5 0.82 EX31_RS21470 phosphoglycerate dehydrogenase 0.90 EX31_RS13445 argininosuccinate synthase 0.82 21
Dickeya dianthicola 67-19 0.82 HGI48_RS18400 phosphoglycerate dehydrogenase 0.92 HGI48_RS00355 argininosuccinate synthase low > 71
Dickeya dianthicola ME23 0.82 DZA65_RS19540 phosphoglycerate dehydrogenase 0.92 DZA65_RS00355 argininosuccinate synthase 0.66 32
Shewanella loihica PV-4 0.70 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.15 Shew_0205 argininosuccinate synthase (RefSeq) 0.98 11
Shewanella oneidensis MR-1 0.70 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) 0.14 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.88 24
Shewanella sp. ANA-3 0.70 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.13 Shewana3_3902 argininosuccinate synthase (RefSeq) 0.81 61
Pseudomonas sp. S08-1 0.67 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.12 OH686_03930 argininosuccinate synthase low > 80
Pseudomonas sp. RS175 0.66 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.12 PFR28_03353 Argininosuccinate synthase — —
Pseudomonas stutzeri RCH2 0.66 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases 0.12 Psest_3121 argininosuccinate synthase — —
Pseudomonas putida KT2440 0.66 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 0.12 PP_1088 Argininosuccinate synthase 0.77 13
Acidovorax sp. GW101-3H11 0.65 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.78 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS28695 phosphoglycerate dehydrogenase 0.11 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas fluorescens SBW25 0.65 PFLU_RS28695 phosphoglycerate dehydrogenase 0.11 PFLU_RS05725 argininosuccinate synthase — —
Marinobacter adhaerens HP15 0.65 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein 0.11 HP15_2367 argininosuccinate synthase — —
Variovorax sp. SCN45 0.63 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.77 GFF3096 Argininosuccinate synthase (EC 6.3.4.5) — —
Acinetobacter radioresistens SK82 0.63 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.78 MPMX26_02260 Argininosuccinate synthase low > 36
Variovorax sp. OAS795 0.63 ABID97_RS07235 phosphoglycerate dehydrogenase 0.76 ABID97_RS21670 argininosuccinate synthase — —
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_10055 serA phosphoglycerate dehydrogenase 0.09 OKGIIK_09465 argG argininosuccinate synthase low > 52
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.76 GFF294 Argininosuccinate synthase (EC 6.3.4.5) — —
Rhodospirillum rubrum S1H 0.58 Rru_A2456 Phosphoglycerate dehydrogenase (NCBI) 0.15 Rru_A3751 Argininosuccinate synthase (NCBI) — —
Rhizobium sp. OAE497 0.58 ABIE40_RS30040 phosphoglycerate dehydrogenase 0.14 ABIE40_RS18150 argininosuccinate synthase — —
Azospirillum sp. SherDot2 0.55 MPMX19_00753 D-3-phosphoglycerate dehydrogenase 0.13 MPMX19_02369 Argininosuccinate synthase — —
Bosea sp. OAE506 0.55 ABIE41_RS08410 phosphoglycerate dehydrogenase 0.12 ABIE41_RS00340 argininosuccinate synthase — —
Azospirillum brasilense Sp245 0.55 AZOBR_RS10940 3-phosphoglycerate dehydrogenase 0.14 AZOBR_RS00785 argininosuccinate synthase — —
Castellaniella sp019104865 MT123 0.53 ABCV34_RS15150 phosphoglycerate dehydrogenase 0.79 ABCV34_RS05390 argininosuccinate synthase — —
Bifidobacterium breve UCC2003 0.45 BBR_RS16970 phosphoglycerate dehydrogenase 0.11 BBR_RS13915 argininosuccinate synthase low > 34

Not shown: 19 genomes with orthologs for b2913 only; 27 genomes with orthologs for b3172 only