Conservation of cofitness between b3693 and b2553 in Escherichia coli BW25113

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3693 dgoK 2-oxo-3-deoxygalactonate kinase (NCBI) 1.0 b2553 glnB regulatory protein P-II for glutamine synthetase (NCBI) 0.18 13
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00009 putative 2-dehydro-3-deoxygalactonokinase DgoK1 1.00 OHPLBJKB_01154 Nitrogen regulatory protein P-II 1 low > 73
Escherichia coli BL21 0.99 ECD_03577 2-oxo-3-deoxygalactonate kinase 1.00 ECD_02445 regulatory protein P-II for glutamine synthetase low > 60
Escherichia coli ECRC62 0.98 BNILDI_04330 dgoK 2-dehydro-3-deoxygalactonokinase 1.00 BNILDI_11975 glnB nitrogen regulatory protein P-II — —
Escherichia coli ECOR27 0.93 NOLOHH_07200 dgoK 2-dehydro-3-deoxygalactonokinase 1.00 NOLOHH_13175 glnB nitrogen regulatory protein P-II — —
Escherichia coli ECOR38 0.93 HEPCGN_13765 dgoK 2-dehydro-3-deoxygalactonokinase 1.00 HEPCGN_20645 glnB nitrogen regulatory protein P-II low > 85
Escherichia coli Nissle 1917 0.93 ECOLIN_RS21275 2-dehydro-3-deoxygalactonokinase 1.00 ECOLIN_RS14450 nitrogen regulatory protein P-II — —
Escherichia fergusonii Becca 0.92 EFB2_00009 putative 2-dehydro-3-deoxygalactonokinase DgoK1 1.00 EFB2_01343 Nitrogen regulatory protein P-II 1 low > 86
Enterobacter asburiae PDN3 0.81 EX28DRAFT_3981 2-keto-3-deoxy-galactonokinase 0.99 EX28DRAFT_0097 nitrogen regulatory protein P-II family low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_00009 putative 2-dehydro-3-deoxygalactonokinase DgoK1 0.99 MPMX20_03422 Nitrogen regulatory protein P-II low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF1763 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) 1.00 GFF2454 Nitrogen regulatory protein P-II low > 78
Klebsiella michiganensis M5al 0.74 BWI76_RS27945 2-oxo-3-deoxygalactonate kinase 0.99 BWI76_RS21245 nitrogen regulatory protein P-II low > 92
Pantoea sp. MT58 0.53 IAI47_00035 2-dehydro-3-deoxygalactonokinase 0.95 IAI47_04950 nitrogen regulatory protein P-II low > 76
Dickeya dianthicola ME23 0.52 DZA65_RS07275 2-dehydro-3-deoxygalactonokinase 0.96 DZA65_RS16810 nitrogen regulatory protein P-II low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS06930 2-dehydro-3-deoxygalactonokinase 0.96 HGI48_RS15730 nitrogen regulatory protein P-II low > 71
Rahnella sp. WP5 0.49 EX31_RS10330 2-dehydro-3-deoxygalactonokinase 0.94 EX31_RS20610 nitrogen regulatory protein P-II low > 89
Serratia liquefaciens MT49 0.28 IAI46_03175 2-dehydro-3-deoxygalactonokinase 0.95 IAI46_19450 nitrogen regulatory protein P-II low > 86
Caulobacter crescentus NA1000 0.28 CCNA_00826 2-dehydro-3-deoxygalactonokinase 0.73 CCNA_02046 nitrogen regulatory protein P-II — —
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_00826 2-dehydro-3-deoxygalactonokinase 0.73 CCNA_02046 nitrogen regulatory protein P-II — —
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS01970 2-dehydro-3-deoxygalactonokinase 0.74 A4249_RS05675 P-II family nitrogen regulator — —
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1624 2-keto-3-deoxy-galactonokinase 0.74 Ga0059261_3385 nitrogen regulatory protein P-II family — —
Variovorax sp. OAS795 0.25 ABID97_RS21210 2-dehydro-3-deoxygalactonokinase 0.80 ABID97_RS14850 P-II family nitrogen regulator low > 91
Variovorax sp. SCN45 0.25 GFF6771 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) 0.80 GFF1151 Nitrogen regulatory protein P-II low > 127
Rhizobium sp. OAE497 0.25 ABIE40_RS05270 2-dehydro-3-deoxygalactonokinase 0.74 ABIE40_RS09340 P-II family nitrogen regulator — —
Dinoroseobacter shibae DFL-12 0.25 Dshi_1242 2-dehydro-3-deoxygalactonokinase (RefSeq) 0.69 Dshi_1838 nitrogen regulatory protein P-II (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS27110 2-dehydro-3-deoxygalactonokinase 0.82 QEN71_RS24890 P-II family nitrogen regulator low > 153
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.3082.1 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) 0.73 Xcc-8004.4913.1 Nitrogen regulatory protein P-II 0.31 48
Sinorhizobium meliloti 1021 0.24 SMc00881 2-dehydro-3-deoxygalactonokinase 0.73 SMc00947 nitrogen regulatory protein PII — —
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS05160 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) (from data) 0.71 HSERO_RS09460 nitrogen regulatory protein P-II 1 — —
Lysobacter sp. OAE881 0.24 ABIE51_RS10900 2-dehydro-3-deoxygalactonokinase 0.74 ABIE51_RS00145 P-II family nitrogen regulator low > 62
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS16950 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) (from data) 0.82 BPHYT_RS05485 nitrogen regulatory protein P-II 1 low > 109
Agrobacterium fabrum C58 0.23 Atu0704 2-dehydro-3-deoxygalactonate kinase 0.73 Atu1769 nitrogen regulatory protein PII — —
Phaeobacter inhibens DSM 17395 0.23 PGA1_c07360 2-dehydro-3-deoxygalactonokinase DgoK 0.69 PGA1_c29400 nitrogen regulatory protein P-II low > 62
Bosea sp. OAE506 0.20 ABIE41_RS03750 2-dehydro-3-deoxygalactonokinase 0.73 ABIE41_RS16890 P-II family nitrogen regulator — —
Azospirillum sp. SherDot2 0.20 MPMX19_03917 putative 2-dehydro-3-deoxygalactonokinase DgoK1 0.73 MPMX19_01554 Nitrogen regulatory protein P-II — —
Ralstonia solanacearum GMI1000 0.12 RS_RS13805 2-dehydro-3-deoxygalactonokinase 0.80 RS_RS11770 nitrogen regulatory protein P-II 1 low > 80

Not shown: 14 genomes with orthologs for b3693 only; 43 genomes with orthologs for b2553 only