Conservation of cofitness between b3389 and b2022 in Escherichia coli BW25113

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3389 aroB 3-dehydroquinate synthase (NCBI) 1.0 b2022 hisB imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase (VIMSS) 0.93 11
Escherichia coli BL21 1.00 ECD_03241 3-dehydroquinate synthase 0.99 ECD_01924 histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase low > 60
Escherichia coli ECOR27 1.00 NOLOHH_08905 aroB 3-dehydroquinate synthase 1.00 NOLOHH_15820 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 57
Escherichia coli ECRC62 1.00 BNILDI_02615 aroB 3-dehydroquinate synthase 0.99 BNILDI_14730 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia fergusonii Becca 1.00 EFB2_00439 3-dehydroquinate synthase 0.99 EFB2_01834 Histidine biosynthesis bifunctional protein HisB low > 86
Escherichia coli ECOR38 1.00 HEPCGN_15935 aroB 3-dehydroquinate synthase 0.99 HEPCGN_03210 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 85
Escherichia coli ECRC101 0.99 OKFHMN_17115 aroB 3-dehydroquinate synthase 1.00 OKFHMN_24505 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli ECRC102 0.99 NIAGMN_14885 aroB 3-dehydroquinate synthase 1.00 NIAGMN_22450 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli ECRC99 0.99 KEDOAH_11025 aroB 3-dehydroquinate synthase 1.00 KEDOAH_03645 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli ECRC101 0.99 MCAODC_07645 aroB 3-dehydroquinate synthase 1.00 MCAODC_20435 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00314 3-dehydroquinate synthase 0.99 OHPLBJKB_01678 Histidine biosynthesis bifunctional protein HisB low > 73
Escherichia coli ECRC98 0.99 JDDGAC_20745 aroB 3-dehydroquinate synthase 1.00 JDDGAC_28615 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS19360 3-dehydroquinate synthase 0.99 ECOLIN_RS11955 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Enterobacter sp. TBS_079 0.89 MPMX20_04278 3-dehydroquinate synthase 0.92 MPMX20_03004 Histidine biosynthesis bifunctional protein HisB 0.82 26
Enterobacter asburiae PDN3 0.88 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) 0.91 EX28DRAFT_0537 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 0.61 20
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) 0.96 GFF3910 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) low > 78
Klebsiella michiganensis M5al 0.85 BWI76_RS26085 3-dehydroquinate synthase 0.88 BWI76_RS18935 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase 0.56 40
Pantoea sp. MT58 0.84 IAI47_01895 3-dehydroquinate synthase 0.82 IAI47_07080 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Rahnella sp. WP5 0.84 EX31_RS04720 3-dehydroquinate synthase 0.83 EX31_RS11450 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Erwinia tracheiphila SCR3 0.82 LU632_RS22865 aroB 3-dehydroquinate synthase 0.83 LU632_RS08935 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.62 20
Serratia liquefaciens MT49 0.81 IAI46_23700 3-dehydroquinate synthase 0.84 IAI46_08200 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB low > 86
Dickeya dadantii 3937 0.81 DDA3937_RS19545 3-dehydroquinate synthase 0.84 DDA3937_RS09725 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Dickeya dianthicola ME23 0.80 DZA65_RS20760 3-dehydroquinate synthase 0.84 DZA65_RS10045 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Dickeya dianthicola 67-19 0.80 HGI48_RS19675 3-dehydroquinate synthase 0.84 HGI48_RS09735 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Pectobacterium carotovorum WPP14 0.79 HER17_RS01780 3-dehydroquinate synthase 0.83 HER17_RS12240 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.91 9
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_13300 3-dehydroquinate synthase 0.68 CSW01_05760 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase low > 62
Shewanella amazonensis SB2B 0.62 Sama_3367 3-dehydroquinate synthase (RefSeq) 0.64 Sama_1944 imidazole glycerol-phosphate dehydratase/histidinol phosphatase (RefSeq) 0.63 35
Shewanella oneidensis MR-1 0.61 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) 0.63 SO2071 hisB imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase (NCBI ptt file) 0.85 32
Shewanella sp. ANA-3 0.61 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) 0.63 Shewana3_1851 imidazole glycerol-phosphate dehydratase/histidinol phosphatase (RefSeq) 0.93 11
Shewanella loihica PV-4 0.60 Shew_0214 3-dehydroquinate synthase (RefSeq) 0.66 Shew_2200 imidazole glycerol-phosphate dehydratase/histidinol phosphatase (RefSeq) 0.73 42
Alteromonas macleodii MIT1002 0.60 MIT1002_00447 3-dehydroquinate synthase 0.65 MIT1002_02635 Histidine biosynthesis bifunctional protein HisB — —
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_11185 aroB 3-dehydroquinate synthase 0.52 OKGIIK_04960 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS10480 3-dehydroquinate synthase 0.54 ABZR86_RS06720 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.80 38
Lysobacter sp. OAE881 0.41 ABIE51_RS16100 3-dehydroquinate synthase 0.54 ABIE51_RS13315 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) 0.53 Xcc-8004.2946.1 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 0.65 11
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS04310 3-dehydroquinate synthase 0.53 LRK54_RS01595 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Rhodanobacter denitrificans MT42 0.41 LRK55_RS04085 3-dehydroquinate synthase 0.53 LRK55_RS01375 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS05215 3-dehydroquinate synthase 0.43 ABZR88_RS06870 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.22 CA264_13105 3-dehydroquinate synthase 0.47 CA264_05040 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase — —
Bacteroides stercoris CC31F 0.21 HMPREF1181_RS09265 3-dehydroquinate synthase 0.46 HMPREF1181_RS04850 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB 0.72 54
Bacteroides ovatus ATCC 8483 0.21 BACOVA_04629 3-dehydroquinate synthase 0.46 BACOVA_01232 histidinol-phosphatase — —

Not shown: 49 genomes with orthologs for b3389 only; 6 genomes with orthologs for b2022 only