Conservation of cofitness between b1605 and b0441 in Escherichia coli BW25113

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1605 ydgI predicted arginine/ornithine antiporter transporter (NCBI) 1.0 b0441 ppiD peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) 0.26 7
Escherichia coli ECOR27 1.00 NOLOHH_18185 ydgI Putative arginine/ornithine antiporter 1.00 NOLOHH_01245 ppiD peptidylprolyl isomerase — —
Escherichia coli BL21 1.00 ECD_01574 putative arginine/ornithine antiporter transporter 1.00 ECD_00393 periplasmic folding chaperone, has an inactive PPIase domain — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02121 Putative arginine/ornithine antiporter 1.00 OHPLBJKB_03232 Peptidyl-prolyl cis-trans isomerase D low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS08965 amino acid permease 1.00 ECOLIN_RS02645 peptidylprolyl isomerase — —
Escherichia coli ECOR38 1.00 HEPCGN_06055 ydgI Putative arginine/ornithine antiporter 1.00 HEPCGN_06925 ppiD peptidylprolyl isomerase low > 85
Escherichia coli ECRC62 1.00 BNILDI_16975 ydgI Putative arginine/ornithine antiporter 1.00 BNILDI_22660 ppiD peptidylprolyl isomerase — —
Escherichia coli ECRC99 1.00 KEDOAH_00425 ydgI Putative arginine/ornithine antiporter 1.00 KEDOAH_19655 ppiD peptidylprolyl isomerase — —
Escherichia coli ECRC102 1.00 NIAGMN_00395 ydgI Putative arginine/ornithine antiporter 1.00 NIAGMN_06365 ppiD peptidylprolyl isomerase — —
Escherichia coli ECRC98 1.00 JDDGAC_02270 ydgI Putative arginine/ornithine antiporter 1.00 JDDGAC_11965 ppiD peptidylprolyl isomerase — —
Escherichia fergusonii Becca 1.00 EFB2_02387 Putative arginine/ornithine antiporter 1.00 EFB2_03616 Peptidyl-prolyl cis-trans isomerase D low > 86
Escherichia coli ECRC101 1.00 MCAODC_17730 ydgI Putative arginine/ornithine antiporter 1.00 MCAODC_27535 ppiD peptidylprolyl isomerase — —
Escherichia coli ECRC101 1.00 OKFHMN_27680 ydgI Putative arginine/ornithine antiporter 1.00 OKFHMN_08310 ppiD peptidylprolyl isomerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1798 Arginine/ornithine antiporter ArcD 0.87 GFF4357 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) low > 78
Enterobacter sp. TBS_079 0.88 MPMX20_02029 Putative arginine/ornithine antiporter 0.85 MPMX20_01032 Peptidyl-prolyl cis-trans isomerase D low > 85
Klebsiella michiganensis M5al 0.88 BWI76_RS16225 arginine:ornithine antiporter 0.81 BWI76_RS06545 peptidylprolyl isomerase low > 92
Enterobacter asburiae PDN3 0.88 EX28DRAFT_1546 transporter, basic amino acid/polyamine antiporter (APA) family 0.85 EX28DRAFT_2529 Parvulin-like peptidyl-prolyl isomerase low > 76
Serratia liquefaciens MT49 0.75 IAI46_13285 amino acid permease 0.57 IAI46_05030 peptidylprolyl isomerase low > 86
Pantoea sp. MT58 0.70 IAI47_09555 amino acid permease 0.68 IAI47_14635 peptidylprolyl isomerase low > 76
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_02275 arginine:ornithine antiporter 0.32 CSW01_09595 peptidylprolyl isomerase low > 62
Azospirillum brasilense Sp245 0.44 AZOBR_RS13260 amino acid APC transporter 0.14 AZOBR_RS07495 peptidylprolyl isomerase low > 97
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_1517 Arginine/ornithine antiporter ArcD 0.19 Pf6N2E2_2214 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) — —
Pseudomonas simiae WCS417 0.42 PS417_22325 amino acid APC transporter 0.18 PS417_17215 peptidylprolyl isomerase low > 88
Pseudomonas stutzeri RCH2 0.42 Psest_0273 arginine/ornithine antiporter 0.19 Psest_2283 Parvulin-like peptidyl-prolyl isomerase — —
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_03465 arginine-ornithine antiporter 0.20 AO353_20200 peptidylprolyl isomerase low > 101
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS23965 arginine-ornithine antiporter 0.19 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase — —
Pseudomonas fluorescens SBW25 0.42 PFLU_RS23965 arginine-ornithine antiporter 0.19 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase — —
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_23935 arginine-ornithine antiporter 0.19 AO356_01725 peptidylprolyl isomerase — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_1875 Arginine/ornithine antiporter ArcD 0.19 PfGW456L13_2556 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) low > 87
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_2683 arginine:ornithine antiporter, APA family 0.17 Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_2683 arginine:ornithine antiporter, APA family 0.17 Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase low > 86
Pseudomonas putida KT2440 0.41 PP_1002 arginine/ornithine antiporter 0.18 PP_2304 putative Peptidyl-prolyl cis-trans isomerase D low > 96
Pseudomonas sp. RS175 0.40 PFR28_02177 Arginine/ornithine antiporter 0.20 PFR28_01231 Peptidyl-prolyl cis-trans isomerase D — —
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_614 Arginine/ornithine antiporter ArcD 0.19 Pf1N1B4_3949 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) — —
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS27675 amino acid APC transporter 0.13 BPHYT_RS09480 peptidyl-prolyl cis-trans isomerase low > 109
Lysobacter sp. OAE881 0.38 ABIE51_RS10075 basic amino acid/polyamine antiporter 0.16 ABIE51_RS14120 peptidyl-prolyl cis-trans isomerase low > 62
Pseudomonas sp. S08-1 0.35 OH686_14345 arginine-ornithine antiporter 0.19 OH686_03625 Peptidyl-prolyl cis-trans isomerase PpiD low > 80

Not shown: 1 genomes with orthologs for b1605 only; 45 genomes with orthologs for b0441 only