Conservation of cofitness between Rru_A1678 and Rru_A0260 in Rhodospirillum rubrum S1H

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A1678 Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) 1.0 Rru_A0260 Protein of unknown function DUF466 (NCBI) 0.64 19
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_09730 nitrogen regulation protein NR(I) 0.56 AO356_15695 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3826 Nitrogen regulation protein NR(I) 0.56 Pf6N2E2_5079 COG2879, Hypothetical small protein yjiX — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS01685 nitrogen regulation protein NR(I) 0.55 PFLU_RS26205 YbdD/YjiX family protein low > 109
Enterobacter asburiae PDN3 0.40 EX28DRAFT_4350 nitrogen regulation protein NR(I) 0.58 EX28DRAFT_3535 Uncharacterized small protein low > 76
Pseudomonas fluorescens SBW25 0.40 PFLU_RS01685 nitrogen regulation protein NR(I) 0.55 PFLU_RS26205 YbdD/YjiX family protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1611 Nitrogen regulation protein NR(I) 0.57 Pf1N1B4_2772 COG2879, Hypothetical small protein yjiX low > 87
Pseudomonas simiae WCS417 0.40 PS417_01635 nitrogen regulation protein NR(I) 0.56 PS417_24290 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_12145 nitrogen regulation protein NR(I) 0.58 AO353_13995 hypothetical protein low > 101
Pseudomonas sp. RS175 0.40 PFR28_04944 DNA-binding transcriptional regulator NtrC 0.56 PFR28_03789 hypothetical protein — —
Pseudomonas sp. S08-1 0.40 OH686_10640 nitrogen regulation protein NR(I) 0.59 OH686_16215 Uncharacterized YbdD and YjiX low > 80
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_347 Nitrogen regulation protein NR(I) 0.57 PfGW456L13_1445 COG2879, Hypothetical small protein yjiX low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) 0.59 Psyr_4272 Protein of unknown function DUF466 — —
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) 0.59 Psyr_4272 Protein of unknown function DUF466 low > 86
Dickeya dianthicola ME23 0.40 DZA65_RS22210 nitrogen regulation protein NR(I) 0.56 DZA65_RS17540 YbdD/YjiX family protein low > 75
Serratia liquefaciens MT49 0.40 IAI46_24960 nitrogen regulation protein NR(I) 0.59 IAI46_02545 YbdD/YjiX family protein low > 86
Pectobacterium carotovorum WPP14 0.40 HER17_RS21440 nitrogen regulation protein NR(I) 0.62 HER17_RS15650 YbdD/YjiX family protein low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS21235 nitrogen regulation protein NR(I) 0.56 HGI48_RS16455 YbdD/YjiX family protein low > 71
Escherichia fergusonii Becca 0.39 EFB2_04748 DNA-binding transcriptional regulator NtrC 0.57 EFB2_04095 hypothetical protein low > 86
Dickeya dadantii 3937 0.39 DDA3937_RS00125 nitrogen regulation protein NR(I) 0.57 DDA3937_RS16355 YbdD/YjiX family protein — —
Rahnella sp. WP5 0.39 EX31_RS15880 nitrogen regulation protein NR(I) 0.59 EX31_RS00790 YbdD/YjiX family protein low > 89
Pseudomonas putida KT2440 0.39 PP_5048 two-component system DNA-binding transcriptional dual regulator GlnL/GlnG 0.57 PP_4640 conserved protein of unknown function low > 96
Escherichia coli BW25113 0.39 b3868 glnG fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) 0.57 b4353 yjiX hypothetical protein (NCBI) low > 76
Escherichia coli ECRC98 0.39 JDDGAC_17735 glnG nitrogen regulation protein NR(I) 0.57 JDDGAC_14985 yjiX Uncharacterized protein YjiX — —
Escherichia coli ECRC101 0.39 MCAODC_04610 glnG nitrogen regulation protein NR(I) 0.57 MCAODC_01905 yjiX Uncharacterized protein YjiX low > 87
Escherichia coli ECOR27 0.39 NOLOHH_06240 glnG nitrogen regulation protein NR(I) 0.57 NOLOHH_03770 yjiX Uncharacterized protein YjiX low > 75
Escherichia coli ECRC100 0.39 OKFHMN_14110 glnG nitrogen regulation protein NR(I) 0.57 OKFHMN_11390 yjiX Uncharacterized protein YjiX low > 80
Escherichia coli Nissle 1917 0.39 ECOLIN_RS22295 nitrogen regulation protein NR(I) 0.57 ECOLIN_RS24985 YbdD/YjiX family protein low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_04184 DNA-binding transcriptional regulator NtrC 0.57 OHPLBJKB_03721 hypothetical protein low > 73
Klebsiella michiganensis M5al 0.39 BWI76_RS00385 nitrogen assimilation regulatory protein 0.58 BWI76_RS03815 hypothetical protein low > 92
Escherichia coli ECRC102 0.39 NIAGMN_11865 glnG nitrogen regulation protein NR(I) 0.57 NIAGMN_09240 yjiX Uncharacterized protein YjiX — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF2220 Nitrogen regulation protein NR(I) 0.57 GFF1007 COG2879, Hypothetical small protein yjiX low > 78
Escherichia coli ECRC99 0.39 KEDOAH_14040 glnG nitrogen regulation protein NR(I) 0.57 KEDOAH_16755 yjiX Uncharacterized protein YjiX — —
Escherichia coli ECRC62 0.39 BNILDI_05290 glnG nitrogen regulation protein NR(I) 0.57 BNILDI_07830 yjiX Uncharacterized protein YjiX low > 75
Escherichia coli BL21 0.39 ECD_03753 fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein 0.57 ECD_04219 DUF466 family protein low > 61
Escherichia coli ECOR38 0.39 HEPCGN_12740 glnG nitrogen regulation protein NR(I) 0.57 HEPCGN_09430 yjiX Uncharacterized protein YjiX low > 87
Rhodanobacter denitrificans MT42 0.39 LRK55_RS07730 nitrogen regulation protein NR(I) 0.46 LRK55_RS04470 YbdD/YjiX family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS07980 nitrogen regulation protein NR(I) 0.46 LRK54_RS04690 YbdD/YjiX family protein low > 59
Ralstonia solanacearum PSI07 0.38 RPSI07_RS17815 nitrogen regulation protein NR(I) 0.54 RPSI07_RS23835 DUF466 domain-containing protein low > 81
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS15540 nitrogen regulation protein NR(I) 0.54 RALBFv3_RS09515 DUF466 domain-containing protein — —
Ralstonia solanacearum UW163 0.38 UW163_RS13000 nitrogen regulation protein NR(I) 0.54 UW163_RS04065 DUF466 domain-containing protein — —
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS15680 chemotaxis protein CheY 0.58 HSERO_RS09800 hypothetical protein low > 78
Ralstonia solanacearum GMI1000 0.37 RS_RS06320 nitrogen regulation protein NR(I) 0.56 RS_RS00115 DUF466 domain-containing protein — —

Not shown: 42 genomes with orthologs for Rru_A1678 only; 0 genomes with orthologs for Rru_A0260 only