Conservation of cofitness between Rru_B0039 and Rru_A0089 in Rhodospirillum rubrum S1H

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_B0039 Type I secretion system ATPase, PrtD (NCBI) 1.0 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) 0.59 18
Pseudomonas putida KT2440 0.47 PP_2560 alkaline protease secretion transporter ATP-binding protein 0.46 PP_4516 ATP-dependent DNA 3 low > 96
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_2562 ABC-type protease exporter, ATP-binding component PrtD/AprD 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ low > 87
Caulobacter crescentus NA1000 Δfur 0.46 CCNA_01060 type I protein secretion ATP-binding protein RsaD 0.35 CCNA_03578 ATP-dependent DNA helicase recQ low > 67
Caulobacter crescentus NA1000 0.46 CCNA_01060 type I protein secretion ATP-binding protein RsaD 0.35 CCNA_03578 ATP-dependent DNA helicase recQ low > 66
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_22425 peptidase 0.44 AO353_18430 ATP-dependent DNA helicase RecQ 0.30 11
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0933 Type I secretion system ATPase, PrtD 0.45 Psyr_3738 ATP-dependent DNA helicase RecQ low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0933 Type I secretion system ATPase, PrtD 0.45 Psyr_3738 ATP-dependent DNA helicase RecQ low > 86
Pseudomonas sp. RS175 0.44 PFR28_01992 Type I secretion system ATP-binding protein PrsD 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ low > 88
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_1583 ABC-type protease/lipase transport system, ATPase and permease components 0.44 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ low > 103
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_23565 peptidase 0.44 AO356_04050 ATP-dependent DNA helicase RecQ low > 104
Serratia liquefaciens MT49 0.43 IAI46_08095 type I secretion system permease/ATPase 0.41 IAI46_00770 ATP-dependent DNA helicase RecQ low > 86
Pseudomonas sp. S08-1 0.43 OH686_14625 Type I secretion system ATPase 0.45 OH686_20670 ATP-dependent DNA helicase RecQ low > 80
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS15330 type I secretion system permease/ATPase 0.44 PFLU_RS21920 DNA helicase RecQ low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS15330 type I secretion system permease/ATPase 0.44 PFLU_RS21920 DNA helicase RecQ low > 109
Pseudomonas simiae WCS417 0.41 PS417_13460 peptidase 0.44 PS417_19950 ATP-dependent DNA helicase RecQ low > 88
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_4901 ABC-type protease exporter, ATP-binding component PrtD/AprD 0.44 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ low > 87
Azospirillum brasilense Sp245 0.40 AZOBR_RS22400 ABC transporter ATP-binding protein 0.46 AZOBR_RS02840 ATP-dependent DNA helicase RecQ low > 97
Pectobacterium carotovorum WPP14 0.40 HER17_RS13215 type I secretion system permease/ATPase 0.42 HER17_RS01395 ATP-dependent DNA helicase RecQ low > 75
Variovorax sp. OAS795 0.40 ABID97_RS12525 type I secretion system permease/ATPase 0.43 ABID97_RS03395 DNA helicase RecQ 0.23 63
Acidovorax sp. GW101-3H11 0.39 Ac3H11_4337 type I secretion system ATPase 0.42 Ac3H11_3308 ATP-dependent DNA helicase RecQ low > 79
Bosea sp. OAE506 0.39 ABIE41_RS10105 type I secretion system permease/ATPase 0.49 ABIE41_RS04160 DNA helicase RecQ low > 77
Sinorhizobium meliloti 1021 0.39 SM_b21316 ABC transporter ATP-binding protein/permease 0.43 SMc01566 ATP-dependent DNA helicase low > 103
Dechlorosoma suillum PS 0.39 Dsui_1772 type I secretion system ABC transporter, PrtD family 0.45 Dsui_3092 ATP-dependent DNA helicase RecQ low > 51
Azospirillum sp. SherDot2 0.39 MPMX19_04152 Type I secretion system ATP-binding protein PrsD 0.45 MPMX19_00123 ATP-dependent DNA helicase RecQ low > 112
Agrobacterium fabrum C58 0.39 Atu3383 rhizobicin secretion 0.46 Atu0061 ATP-dependent DNA helicase 0.21 12
Rhizobium sp. OAE497 0.38 ABIE40_RS22630 type I secretion system permease/ATPase 0.44 ABIE40_RS12745 DNA helicase RecQ low > 107
Phaeobacter inhibens DSM 17395 0.38 PGA1_65p00330 type I secretion system ATPase 0.50 PGA1_c31900 ATP-dependent DNA helicase RecQ — —
Dinoroseobacter shibae DFL-12 0.37 Dshi_0139 type I secretion system ATPase (RefSeq) 0.50 Dshi_3334 ATP-dependent DNA helicase RecQ (RefSeq) low > 64
Dickeya dianthicola 67-19 0.37 HGI48_RS10775 type I secretion system permease/ATPase 0.42 HGI48_RS20005 ATP-dependent DNA helicase RecQ low > 71
Dickeya dadantii 3937 0.37 DDA3937_RS10820 type I secretion system permease/ATPase 0.42 DDA3937_RS19850 ATP-dependent DNA helicase RecQ low > 74
Dickeya dianthicola ME23 0.37 DZA65_RS11245 type I secretion system permease/ATPase 0.42 DZA65_RS21045 ATP-dependent DNA helicase RecQ low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF2374 Type I secretion system ATPase, LssB family LapB 0.41 GFF1958 ATP-dependent DNA helicase RecQ low > 90
Magnetospirillum magneticum AMB-1 0.21 AMB_RS17585 type I secretion system ATPase 0.46 AMB_RS21505 DNA helicase RecQ low > 64
Escherichia coli Nissle 1917 0.16 ECOLIN_RS01690 type I secretion system permease/ATPase 0.41 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ low > 55

Not shown: 0 genomes with orthologs for Rru_B0039 only; 61 genomes with orthologs for Rru_A0089 only