Homologs of rbp3 from Synechococcus elongatus PCC 7942

rbp3: RNA-binding region RNP-1
SEED: RNA-binding protein

51 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Synechococcus elongatus PCC 7942	Synpcc7942_0790	rbp3	RNA-binding region RNP-1	strong	100	100
o	Synechocystis sp000284455 PCC 6803	SGL_RS14575		RNA-binding protein	strong	49	97
	Acidovorax sp. GW101-3H11	Ac3H11_870		RNA-binding protein	insig.	46	62
	Synechocystis sp000284455 PCC 6803	SGL_RS16605		RNA-binding protein	insig.	48	55
	Bacteroides stercoris CC31F	HMPREF1181_RS03710		RNA-binding protein	insig.	40	71
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS19520		RNA-binding protein	no data	36	56
	Desulfovibrio vulgaris Miyazaki F	DvMF_0195		RNP-1 like RNA-binding protein (RefSeq)	strong	43	57
	Variovorax sp. SCN45	GFF5019		RNA-binding protein	insig.	41	58
	Synechocystis sp000284455 PCC 6803	SGL_RS07155		RNA-binding protein	no data	44	54
	Desulfovibrio vulgaris Miyazaki F	DvMF_0050		RNP-1 like RNA-binding protein (RefSeq)	no data	40	57
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF2446		RNA-binding protein	cofit	39	58
	Acidovorax sp. GW101-3H11	Ac3H11_4274		RNA-binding protein	strong	37	58
	Variovorax sp. OAS795	ABID97_RS04115		RNA-binding protein	strong	39	58
	Variovorax sp. OAS795	ABID97_RS02610		RNA-binding protein	strong	37	58
	Variovorax sp. SCN45	GFF3267		RNA-binding protein	insig.	37	58
	Bacteroides ovatus ATCC 8483	BACOVA_02523		hypothetical protein	insig.	40	56
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS00575		RNA-binding protein	insig.	41	54
	Desulfovibrio vulgaris Hildenborough JW710	DVU1257		RNA-binding protein (TIGR)	cofit	41	57
	Bacteroides ovatus ATCC 8483	BACOVA_00333		hypothetical protein	strong	40	56
	Bacteroides thetaiotaomicron VPI-5482	BT1887		putative RNA-binding protein rbpA (NCBI ptt file)	no data	40	56
	Bacteroides thetaiotaomicron VPI-5482	BT3840		putative RNA-binding protein rbpA (NCBI ptt file)	strong	40	56
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS04275		RNA-binding protein	insig.	39	56
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS12475		RNA-binding protein	no data	39	54
	Acidovorax sp. GW101-3H11	Ac3H11_4275		RNA-binding protein	no data	37	58
	Synechococcus elongatus PCC 7942	Synpcc7942_0679	rbp1	RNA-binding region RNP-1	strong	43	55
	Bacteroides ovatus ATCC 8483	BACOVA_01523		hypothetical protein	cofit	40	56
	Phocaeicola dorei CL03T12C01	ABI39_RS02340		RNA-binding protein	no data	37	56
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS03095		RNA-binding protein	strong	37	56
	Phocaeicola dorei CL03T12C01	ABI39_RS04260		RNA-binding protein	sig.	39	54
	Phocaeicola dorei CL03T12C01	ABI39_RS16930		RNA-binding protein	insig.	39	56
	Synechococcus elongatus PCC 7942	Synpcc7942_1999	rbp2	RNA-binding region RNP-1	strong	38	69
	Desulfovibrio vulgaris Miyazaki F	DvMF_2964		RNP-1 like RNA-binding protein (RefSeq)	sig.	41	57
	Bacteroides thetaiotaomicron VPI-5482	BT0784		putative RNA-binding protein (NCBI ptt file)	no data	39	56
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS17060		RNA-binding protein	insig.	36	56
	Desulfovibrio vulgaris Hildenborough JW710	DVU2215		RNA-binding protein (TIGR)	no data	39	57
	Phocaeicola dorei CL03T12C01	ABI39_RS02830		RNA-binding protein	insig.	37	54
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS08600		RNA-binding protein	insig.	36	56
	Vibrio cholerae E7946 ATCC 55056	CSW01_00805		RNA-binding protein	insig.	39	58
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS02075		RNA-binding protein	insig.	38	56
	Shewanella amazonensis SB2B	Sama_0195		RNA-binding protein (RefSeq)	sig.	36	60
	Shewanella loihica PV-4	Shew_0140		RNP-1-like RNA-binding protein (RefSeq)	sig.	36	61
	Shewanella oneidensis MR-1	SO0208		RNA-binding protein (NCBI ptt file)	strong	34	62
	Shewanella sp. ANA-3	Shewana3_0181		RNP-1-like RNA-binding protein (RefSeq)	strong	33	58
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS06140		RNA-binding protein	sig.	31	54
	Alteromonas macleodii MIT1002	MIT1002_03368		splicing factor, CC1-like family	insig.	36	54
	Desulfovibrio vulgaris Hildenborough JW710	DVU2430		RNA-binding protein (TIGR)	insig.	38	53
	Alteromonas macleodii MIT1002	MIT1002_03076		polyadenylate binding protein, human types 1, 2, 3, 4 family	insig.	31	51
	Kangiella aquimarina DSM 16071	B158DRAFT_1130		RNA-binding proteins (RRM domain)	insig.	31	56
	Bacteroides stercoris CC31F	HMPREF1181_RS07465		RNA-binding protein	strong	32	55
	Acinetobacter radioresistens SK82	MPMX26_00370		hypothetical protein	insig.	33	56
	Acinetobacter baumannii LAC-4	RR41_RS16765		RNA-binding protein	insig.	32	54