Homologs of Psyr_1403 from Pseudomonas syringae pv. syringae B728a

cold-shock DNA-binding protein family
SEED: Cold shock protein CspC
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1845 Cold shock protein CspC strong 99 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_644 Cold shock protein CspC insig. 99 100
  Pseudomonas fluorescens FW300-N2E3 AO353_03615 cold-shock protein strong 99 100
  Pseudomonas fluorescens FW300-N2C3 AO356_17985 cold-shock protein strong 99 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5527 Cold shock protein CspC strong 99 100
  Pseudomonas fluorescens SBW25 PFLU_RS24125 cold-shock protein strong 99 100
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24125 cold-shock protein strong 99 100
  Pseudomonas simiae WCS417 PS417_22485 cold-shock protein no data 99 100
  Pseudomonas sp. RS175 PFR28_03420 hypothetical protein strong 97 100
  Pseudomonas syringae pv. syringae B728a Psyr_1403 cold-shock DNA-binding protein family no data 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1403 cold-shock DNA-binding protein family no data 100 100
  Pseudomonas putida KT2440 PP_1209 cold-shock protein no data 96 92
  Pseudomonas sp. S08-1 OH686_19095 Cold shock protein of CSP family cofit 93 95
  Pseudomonas stutzeri RCH2 Psest_1491 Cold shock proteins sig. 88 90
  Pseudomonas sp. S08-1 OH686_06580 Cold shock protein of CSP family insig. 74 90
  Pseudomonas putida KT2440 PP_1522 major cold shock protein sig. 67 92
  Pseudomonas fluorescens SBW25 PFLU_RS06205 cold-shock protein insig. 66 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06205 cold-shock protein insig. 66 92
  Pseudomonas simiae WCS417 PS417_06140 cold-shock protein strong 66 92
  Pseudomonas sp. RS175 PFR28_00383 Major cold shock protein CspA insig. 66 92
  Pseudomonas fluorescens FW300-N2C3 AO356_06105 cold-shock protein insig. 66 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3086 Cold shock protein CspA no data 66 92
  Pseudomonas stutzeri RCH2 Psest_1615 Cold shock proteins no data 70 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3068 Cold shock protein CspA no data 66 92
  Pseudomonas fluorescens FW300-N2E3 AO353_16395 cold-shock protein no data 66 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4724 Cold shock protein CspA no data 66 92
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00530 cold-shock protein insig. 68 93
  Lysobacter sp. OAE881 ABIE51_RS18590 cold-shock protein no data 63 96
o Acinetobacter radioresistens SK82 MPMX26_01112 Major cold shock protein CspA strong 68 90
  Rhodanobacter sp. FW510-T8 OKGIIK_03600 cspC cold-shock protein no data 67 90
  Rhodanobacter sp. FW510-T8 OKGIIK_15385 cspC cold-shock protein no data 65 95
  Marinobacter adhaerens HP15 HP15_1157 cold-shock DNA-binding domain protein strong 69 85
  Rhodanobacter denitrificans MT42 LRK55_RS14490 cold-shock protein cofit 65 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14775 cold-shock protein strong 65 90
  Rhodanobacter denitrificans MT42 LRK55_RS08385 cold-shock protein no data 65 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08620 cold-shock protein no data 65 93
  Rhodanobacter sp. FW510-T8 OKGIIK_03595 cspC cold-shock protein no data 62 95
  Rhodanobacter denitrificans MT42 LRK55_RS14485 cold-shock protein no data 62 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14770 cold-shock protein no data 62 95
  Lysobacter sp. OAE881 ABIE51_RS12600 cold-shock protein insig. 62 90
  Pseudomonas stutzeri RCH2 Psest_3045 Cold shock proteins sig. 64 90
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00525 cold-shock protein no data 61 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14240 cold-shock protein no data 64 93
  Pseudomonas sp. S08-1 OH686_17410 Cold shock protein of CSP family no data 62 90
  Pseudomonas fluorescens SBW25 PFLU_RS24015 cold-shock protein strong 59 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24015 cold-shock protein strong 59 93
  Pseudomonas sp. RS175 PFR28_03386 Major cold shock protein CspA sig. 59 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5555 Cold shock protein CspA sig. 57 93
  Pseudomonas fluorescens SBW25 PFLU_RS06435 cold-shock protein no data 61 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06435 cold-shock protein no data 61 90
  Pseudomonas sp. RS175 PFR28_00498 Cold shock protein CapB insig. 61 90
  Pseudomonas syringae pv. syringae B728a Psyr_3884 cold-shock DNA-binding protein family no data 61 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3884 cold-shock DNA-binding protein family no data 61 90
  Pseudomonas simiae WCS417 PS417_06370 cold-shock protein strong 61 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4642 Cold shock protein CspA insig. 61 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3171 Cold shock protein CspA no data 61 90
  Pseudomonas fluorescens FW300-N2E3 AO353_16935 cold-shock protein no data 61 90
  Pseudomonas fluorescens FW300-N2C3 AO356_05540 cold-shock protein sig. 61 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2967 Cold shock protein CspA strong 61 90
  Marinobacter adhaerens HP15 HP15_3373 cold shock, CspA no data 58 90
o Kangiella aquimarina DSM 16071 B158DRAFT_1826 Cold shock proteins strong 61 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_624 Cold shock protein CspA no data 57 93
  Pseudomonas fluorescens FW300-N2C3 AO356_18155 cold-shock protein strong 57 93
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00535 cold-shock protein no data 62 89
  Marinobacter adhaerens HP15 HP15_861 cold shock, CspA cofit 60 86
  Pseudomonas syringae pv. syringae B728a Psyr_1094 cold-shock DNA-binding protein family sig. 57 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1094 cold-shock DNA-binding protein family insig. 57 93
  Pseudomonas simiae WCS417 PS417_22375 cold-shock protein sig. 57 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1865 Cold shock protein CspA insig. 57 93
  Pseudomonas fluorescens FW300-N2E3 AO353_03515 cold-shock protein strong 57 93
  Pseudomonas stutzeri RCH2 Psest_1239 Cold shock proteins no data 59 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_14910 cold-shock protein insig. 56 90
  Marinobacter adhaerens HP15 HP15_2054 cold shock, CspA insig. 56 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3498.1 hypothetical protein strong 60 86
  Pseudomonas putida KT2440 PP_1099 Cold shock protein CapB strong 55 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2268.1 hypothetical protein no data 56 93
  Pseudomonas sp. S08-1 OH686_05655 Cold shock protein of CSP family no data 57 93
  Pseudomonas fluorescens SBW25 PFLU_RS21685 cold-shock protein insig. 62 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21685 cold-shock protein sig. 62 84
  Shewanella loihica PV-4 Shew_1614 cold-shock DNA-binding domain-containing protein (RefSeq) no data 61 84
  Shewanella sp. ANA-3 Shewana3_2569 cold-shock DNA-binding protein family protein (RefSeq) no data 61 84
  Shewanella oneidensis MR-1 SO2787 cold shock domain family protein (NCBI ptt file) no data 61 84
  Pseudomonas syringae pv. syringae B728a Psyr_2160 cold-shock DNA-binding protein family insig. 57 95
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2160 cold-shock DNA-binding protein family no data 57 95
  Alteromonas macleodii MIT1002 MIT1002_03628 Cold shock-like protein CspG cofit 61 86
  Shewanella amazonensis SB2B Sama_1960 cold-shock DNA-binding domain-containing protein (RefSeq) insig. 59 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_14830 cold-shock protein CspA no data 57 93
  Pseudomonas sp. S08-1 OH686_20120 Cold shock protein of CSP family no data 55 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_18795 cold-shock protein CspV insig. 54 93
  Kangiella aquimarina DSM 16071 B158DRAFT_1310 Cold shock proteins insig. 51 93
  Shewanella amazonensis SB2B Sama_1970 cold-shock DNA-binding domain-containing protein (RefSeq) no data 59 84
  Marinobacter adhaerens HP15 HP15_2835 cold shock, CspA cofit 57 86
  Shewanella loihica PV-4 Shew_1165 cold-shock DNA-binding domain-containing protein (RefSeq) no data 57 88
  Dickeya dianthicola 67-19 HGI48_RS19865 cold-shock protein no data 54 92
  Dickeya dianthicola ME23 DZA65_RS20940 cold-shock protein insig. 54 92
  Acinetobacter radioresistens SK82 MPMX26_01659 Cold shock-like protein CspG insig. 51 93
  Pseudomonas simiae WCS417 PS417_19715 cold-shock protein no data 60 84
  Acinetobacter radioresistens SK82 MPMX26_01347 Cold shock protein CspV insig. 50 90
  Dickeya dadantii 3937 DDA3937_RS19755 cold-shock protein insig. 53 92
  Erwinia tracheiphila SCR3 LU632_RS19015 cspA RNA chaperone/antiterminator CspA insig. 55 93