| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5985 | | Extracellular solute-binding protein, family 3 | insig. | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_20330 | | ABC transporter substrate-binding protein | insig. | 95 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_02976 | | hypothetical protein | insig. | 85 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_390 | | Extracellular solute-binding protein, family 3 | insig. | 79 | 100 |
| o | Pseudomonas sp. DMC3 | GFF4716 | | hypothetical protein | cofit | 76 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2138 | | Extracellular solute-binding protein, family 3 | insig. | 77 | 92 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_01225 | | ABC transporter substrate-binding protein | sig. | 73 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_21290 | | ABC transporter substrate-binding protein | insig. | 67 | 97 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS22910 | | transporter substrate-binding domain-containing protein | insig. | 70 | 92 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS22910 | | transporter substrate-binding domain-containing protein | insig. | 70 | 92 |
| o | Pseudomonas orientalis W4I3 | QF045_RS23375 | | transporter substrate-binding domain-containing protein | insig. | 70 | 92 |
| o | Pseudomonas sp. SVBP6 | COO64_RS18835 | | ABC transporter substrate-binding protein | insig. | 65 | 96 |
| o | Pseudomonas sp. BP01 | JOY50_RS19015 | | ABC transporter substrate-binding protein | insig. | 66 | 99 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04400 | | hypothetical protein | insig. | 68 | 91 |
| o | Pseudomonas putida KT2440 | PP_4200 | | conserved exported protein of unknown function | insig. | 67 | 94 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_1997 | | amino acid ABC transporter substrate-binding protein, PAAT family | sig. | 64 | 95 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1997 | | amino acid ABC transporter substrate-binding protein, PAAT family | insig. | 64 | 95 |
| o | Pseudomonas sp. S08-1 | OH686_04215 | | ABC-type amino acid transport/signal transduction system, periplasmic component/domain | cofit | 54 | 92 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS02480 | | transporter substrate-binding domain-containing protein | sig. | 51 | 97 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_14745 | | amino acid ABC transporter substrate-binding protein | insig. | 51 | 97 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS33110 | | transporter substrate-binding domain-containing protein | strong | 51 | 97 |
| o | Pseudomonas segetis P6 | ACVTMO_RS10580 | | substrate-binding periplasmic protein | insig. | 49 | 93 |
| o | Pseudomonas stutzeri RCH2 | Psest_1707 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | sig. | 49 | 94 |
| | Pseudomonas putida KT2440 | PP_3624 | | conserved exported protein of unknown function | insig. | 42 | 88 |
| | Pseudomonas sp. BP01 | JOY50_RS07545 | | ABC transporter substrate-binding protein | insig. | 44 | 86 |
| o | Marinobacter adhaerens HP15 | HP15_4048 | | extracellular solute-binding protein, family 3 | insig. | 33 | 88 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS17700 | | amino acid-binding protein | insig. | 26 | 89 |
| | Pseudomonas sp. SVBP6 | COO64_RS21030 | | ABC transporter substrate-binding protein | insig. | 22 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS10710 | | transporter substrate-binding domain-containing protein | sig. | 26 | 87 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS51350 | | transporter substrate-binding domain-containing protein | strong | 26 | 87 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28625 | | amino acid ABC transporter substrate-binding protein | sig. | 26 | 87 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_24815 | | amino acid ABC transporter substrate-binding protein | insig. | 24 | 92 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3213 | | FIG00956444: hypothetical protein | insig. | 25 | 93 |
| | Pseudomonas putida KT2440 | PP_3729 | | Periplasmic amino acid-binding protein-related protein | sig. | 23 | 77 |
| | Pseudomonas sp. BP01 | JOY50_RS08130 | | ABC transporter substrate-binding protein | insig. | 23 | 85 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0387 | | extracellular solute-binding protein family 3 (RefSeq) | insig. | 23 | 81 |
| | Pseudomonas sp. SVBP6 | COO64_RS04945 | | transporter substrate-binding domain-containing protein | insig. | 27 | 81 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1292 | | multi-sensor hybrid histidine kinase | insig. | 24 | 51 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1292 | | multi-sensor hybrid histidine kinase | insig. | 24 | 51 |
| | Variovorax sp. SCN45 | GFF654 | | ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) | insig. | 29 | 79 |
| | Pseudomonas sp. BP01 | JOY50_RS09800 | | ABC transporter substrate-binding protein | insig. | 24 | 77 |
| | Pseudomonas sp. RS175 | PFR28_00992 | | Virulence sensor protein BvgS | insig. | 24 | 65 |
| | Paraburkholderia graminis OAS925 | ABIE53_001926 | | polar amino acid transport system substrate-binding protein | insig. | 36 | 22 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF188 | | probable extracellular solute-binding protein | insig. | 37 | 31 |
| | Pseudomonas sp. RS175 | PFR28_02865 | | Sensor histidine kinase RcsC | insig. | 36 | 31 |
| | Pseudomonas segetis P6 | ACVTMO_RS18290 | | transporter substrate-binding domain-containing protein | insig. | 32 | 24 |
| | Shewanella sp. ANA-3 | Shewana3_1143 | | extracellular solute-binding protein (RefSeq) | sig. | 27 | 57 |
| | Pseudomonas putida KT2440 | PP_4979 | | putative Periplasmic binding protein | sig. | 26 | 67 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS41405 | | transporter substrate-binding domain-containing protein | insig. | 26 | 51 |
| | Pseudomonas sp. SVBP6 | COO64_RS04945 | | transporter substrate-binding domain-containing protein | insig. | 33 | 27 |