Homologs of GFF675 from Variovorax sp. SCN45

KEGG: 2'-5' RNA ligase

39 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF675 KEGG: 2'-5' RNA ligase insig. 100 100
  Burkholderia phytofirmans PsJN BPHYT_RS11595 phosphoesterase no data 26 92
  Ralstonia solanacearum PSI07 RPSI07_RS16920 RNA 2',3'-cyclic phosphodiesterase insig. 31 68
o Klebsiella pneumoniae MKP103 KDGMDA_13280 RNA 2' 3'-cyclic phosphodiesterase insig. 33 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00580 RNA 2',3'-cyclic phosphodiesterase insig. 30 69
  Ralstonia solanacearum UW163 UW163_RS13910 RNA 2',3'-cyclic phosphodiesterase insig. 30 69
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15780 2'-5' RNA ligase family protein insig. 27 77
  Ralstonia solanacearum GMI1000 RS_RS07265 RNA 2',3'-cyclic phosphodiesterase insig. 31 77
  Variovorax sp. SCN45 GFF203 hypothetical protein insig. 25 95
  Paraburkholderia graminis OAS925 ABIE53_002399 2'-5' RNA ligase insig. 28 99
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3617.1 FIG01209673: hypothetical protein insig. 32 69
  Escherichia fergusonii Becca EFB2_03897 RNA 2',3'-cyclic phosphodiesterase insig. 31 99
  Enterobacter asburiae PDN3 EX28DRAFT_3736 2'-5' RNA ligase insig. 30 99
  Sphingobium sp. HT1-2 GFF605 Putative ligase protein cofit 29 75
  Caulobacter crescentus NA1000 CCNA_01713 2'-5' RNA ligase family protein insig. 30 70
  Caulobacter crescentus NA1000 Δfur CCNA_01713 2'-5' RNA ligase family protein cofit 30 70
  Escherichia coli Nissle 1917 ECOLIN_RS00825 RNA 2',3'-cyclic phosphodiesterase no data 33 79
  Escherichia coli Nissle 1917 ECOLIN_RS25975 RNA 2',3'-cyclic phosphodiesterase no data 33 79
  Escherichia coli BL21 ECD_00146 2'-5' RNA ligase insig. 31 99
  Escherichia coli ECOR27 NOLOHH_02680 thpR RNA 2',3'-cyclic phosphodiesterase insig. 31 99
  Escherichia coli ECRC62 BNILDI_08990 thpR RNA 2',3'-cyclic phosphodiesterase insig. 31 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03515 'RNA 2',3'-cyclic phosphodiesterase' transl_table=11 insig. 31 99
  Escherichia coli BW25113 b0147 yadP orf, hypothetical protein (VIMSS) strong 31 99
  Serratia liquefaciens MT49 IAI46_21200 RNA 2',3'-cyclic phosphodiesterase insig. 29 99
  Escherichia coli ECOR38 HEPCGN_08285 thpR RNA 2',3'-cyclic phosphodiesterase insig. 31 99
  Caulobacter crescentus NA1000 CCNA_03776 2'-5' RNA ligase strong 34 54
  Caulobacter crescentus NA1000 Δfur CCNA_03776 2'-5' RNA ligase cofit 34 54
  Ralstonia sp. UNC404CL21Col ABZR87_RS12095 RNA 2',3'-cyclic phosphodiesterase insig. 32 68
  Rhizobium sp. OAE497 ABIE40_RS01245 2'-5' RNA ligase family protein insig. 32 65
  Klebsiella michiganensis M5al BWI76_RS05025 2'-5' RNA ligase sig. 27 99
  Escherichia coli ECRC100 OKFHMN_10335 thpR RNA 2',3'-cyclic phosphodiesterase insig. 33 77
  Escherichia coli ECRC101 MCAODC_00850 thpR RNA 2',3'-cyclic phosphodiesterase insig. 33 77
  Escherichia coli ECRC102 NIAGMN_08185 thpR RNA 2',3'-cyclic phosphodiesterase cofit 33 77
  Escherichia coli ECRC98 JDDGAC_13930 thpR RNA 2',3'-cyclic phosphodiesterase sig. 33 77
  Escherichia coli ECRC99 KEDOAH_17820 thpR RNA 2',3'-cyclic phosphodiesterase no data 33 77
  Rhodanobacter denitrificans MT42 LRK55_RS15535 2'-5' RNA ligase family protein insig. 27 77
  Enterobacter sp. TBS_079 MPMX20_00833 RNA 2',3'-cyclic phosphodiesterase insig. 30 99
  Pseudomonas stutzeri RCH2 Psest_3556 2'-5' RNA ligase insig. 30 99
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2766 2'-5' RNA ligase insig. 29 58