Homologs of GFF5019 from Variovorax sp. SCN45

RNA-binding protein
SEED: RNA-binding protein

51 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5019 RNA-binding protein insig. 100 100
  Variovorax sp. OAS795 ABID97_RS04115 RNA-binding protein strong 97 65
  Acidovorax sp. GW101-3H11 Ac3H11_4274 RNA-binding protein strong 81 65
  Variovorax sp. OAS795 ABID97_RS02610 RNA-binding protein strong 83 64
  Variovorax sp. SCN45 GFF3267 RNA-binding protein insig. 82 65
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2446 RNA-binding protein cofit 79 64
  Acidovorax sp. GW101-3H11 Ac3H11_4275 RNA-binding protein no data 75 65
  Acidovorax sp. GW101-3H11 Ac3H11_870 RNA-binding protein insig. 61 63
  Desulfovibrio vulgaris Miyazaki F DvMF_0050 RNP-1 like RNA-binding protein (RefSeq) no data 51 65
  Desulfovibrio vulgaris Hildenborough JW710 DVU2215 RNA-binding protein (TIGR) no data 52 65
  Phocaeicola dorei CL03T12C01 ABI39_RS02340 RNA-binding protein no data 53 57
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03095 RNA-binding protein strong 53 57
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02075 RNA-binding protein insig. 51 57
  Desulfovibrio vulgaris Miyazaki F DvMF_0195 RNP-1 like RNA-binding protein (RefSeq) strong 51 65
  Synechocystis sp000284455 PCC 6803 SGL_RS16605 RNA-binding protein insig. 51 60
  Bacteroides ovatus ATCC 8483 BACOVA_02523 hypothetical protein insig. 49 57
  Bacteroides stercoris CC31F HMPREF1181_RS03710 RNA-binding protein insig. 43 70
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS17060 RNA-binding protein insig. 49 57
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00575 RNA-binding protein insig. 48 57
  Desulfovibrio vulgaris Hildenborough JW710 DVU2430 RNA-binding protein (TIGR) insig. 53 57
  Desulfovibrio vulgaris Miyazaki F DvMF_2964 RNP-1 like RNA-binding protein (RefSeq) sig. 49 65
  Desulfovibrio vulgaris Hildenborough JW710 DVU1257 RNA-binding protein (TIGR) cofit 46 67
  Synechocystis sp000284455 PCC 6803 SGL_RS07155 RNA-binding protein no data 49 62
  Bacteroides thetaiotaomicron VPI-5482 BT0784 putative RNA-binding protein (NCBI ptt file) no data 47 57
  Bacteroides ovatus ATCC 8483 BACOVA_01523 hypothetical protein cofit 45 60
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08600 RNA-binding protein insig. 48 57
  Phocaeicola dorei CL03T12C01 ABI39_RS02830 RNA-binding protein insig. 48 57
  Bacteroides thetaiotaomicron VPI-5482 BT1887 putative RNA-binding protein rbpA (NCBI ptt file) no data 44 60
  Bacteroides ovatus ATCC 8483 BACOVA_00333 hypothetical protein strong 51 57
  Bacteroides thetaiotaomicron VPI-5482 BT3840 putative RNA-binding protein rbpA (NCBI ptt file) strong 51 57
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04275 RNA-binding protein insig. 48 57
  Phocaeicola dorei CL03T12C01 ABI39_RS16930 RNA-binding protein insig. 48 57
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19520 RNA-binding protein no data 44 62
  Synechococcus elongatus PCC 7942 Synpcc7942_1999 rbp2 RNA-binding region RNP-1 strong 38 70
  Bacteroides stercoris CC31F HMPREF1181_RS07465 RNA-binding protein strong 44 57
  Synechococcus elongatus PCC 7942 Synpcc7942_0790 rbp3 RNA-binding region RNP-1 strong 40 76
  Shewanella amazonensis SB2B Sama_0195 RNA-binding protein (RefSeq) sig. 46 56
  Shewanella loihica PV-4 Shew_0140 RNP-1-like RNA-binding protein (RefSeq) sig. 44 59
  Shewanella sp. ANA-3 Shewana3_0181 RNP-1-like RNA-binding protein (RefSeq) strong 49 56
  Shewanella oneidensis MR-1 SO0208 RNA-binding protein (NCBI ptt file) strong 49 56
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12475 RNA-binding protein no data 41 55
  Synechococcus elongatus PCC 7942 Synpcc7942_0679 rbp1 RNA-binding region RNP-1 strong 49 58
  Phocaeicola dorei CL03T12C01 ABI39_RS04260 RNA-binding protein sig. 41 55
  Synechocystis sp000284455 PCC 6803 SGL_RS14575 RNA-binding protein strong 39 60
  Alteromonas macleodii MIT1002 MIT1002_03076 polyadenylate binding protein, human types 1, 2, 3, 4 family insig. 40 53
  Vibrio cholerae E7946 ATCC 55056 CSW01_00805 RNA-binding protein insig. 37 57
  Acinetobacter baumannii LAC-4 RR41_RS16765 RNA-binding protein insig. 41 50
  Kangiella aquimarina DSM 16071 B158DRAFT_1130 RNA-binding proteins (RRM domain) insig. 39 56
  Alteromonas macleodii MIT1002 MIT1002_03368 splicing factor, CC1-like family insig. 37 56
  Acinetobacter radioresistens SK82 MPMX26_00370 hypothetical protein insig. 36 61
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06140 RNA-binding protein sig. 29 54