Homologs of GFF4607 from Variovorax sp. SCN45

Putative DNA methylase
SEED: DNA methylase, putative

67 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4607 Putative DNA methylase insig. 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS12370 endonuclease domain-containing protein insig. 53 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS12630 endonuclease domain-containing protein insig. 52 86
  Rhodanobacter sp. FW510-T8 OKGIIK_02125 DNA methylase insig. 56 71
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.579.1 DNA methylase, putative insig. 48 90
o Enterobacter asburiae PDN3 EX28DRAFT_2994 Uncharacterized protein conserved in bacteria insig. 51 83
o Lysobacter sp. OAE881 ABIE51_RS04870 endonuclease domain-containing protein insig. 52 85
o Escherichia coli BL21 ECD_01266 DUF559 family endonuclease-related protein no data 50 83
o Escherichia coli BW25113 b1289 ycjD hypothetical protein (NCBI) sig. 50 83
  Azospirillum brasilense Sp245 AZOBR_RS18925 hypothetical protein insig. 59 71
o Escherichia coli ECRC62 BNILDI_18320 ycjD DUF559 domain-containing protein insig. 50 83
o Escherichia coli ECOR27 NOLOHH_20170 DUF559 domain-containing protein sig. 50 83
  Lysobacter sp. OAE881 ABIE51_RS04080 DUF559 domain-containing protein insig. 51 92
  Rhodanobacter sp. FW510-T8 OKGIIK_11905 ycjD Very-short-patch-repair endonuclease insig. 52 75
  Azospirillum sp. SherDot2 MPMX19_00696 Crossover junction endodeoxyribonuclease RuvC sig. 45 90
o Sphingobium sp. HT1-2 GFF2091 hypothetical protein cofit 51 86
o Variovorax sp. OAS795 ABID97_RS05870 endonuclease domain-containing protein insig. 50 83
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16555 DUF559 domain-containing protein insig. 50 75
o Pseudomonas sp. S08-1 OH686_16010 hypothetical protein insig. 47 91
  Sphingobium sp. HT1-2 GFF679 hypothetical protein cofit 47 76
o Acidovorax sp. GW101-3H11 Ac3H11_2324 DNA methylase, putative insig. 45 91
  Rhodopseudomonas palustris CGA009 TX73_000185 endonuclease domain-containing protein insig. 46 87
o Enterobacter sp. TBS_079 MPMX20_03814 hypothetical protein sig. 45 81
  Rhodanobacter denitrificans MT42 LRK55_RS11705 DUF559 domain-containing protein insig. 49 75
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11980 DUF559 domain-containing protein insig. 49 75
  Rhodanobacter denitrificans MT42 LRK55_RS03725 endonuclease domain-containing protein insig. 47 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS03955 endonuclease domain-containing protein insig. 47 87
  Sphingobium sp. HT1-2 GFF2835 hypothetical protein insig. 47 87
  Rhodanobacter sp. FW510-T8 OKGIIK_11265 DNA (Cytosine-5-)-methyltransferase insig. 43 83
  Sinorhizobium meliloti 1021 SMc02732 hypothetical protein insig. 49 76
  Agrobacterium fabrum C58 Atu1072 hypothetical protein insig. 42 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03610 imidazole glycerol phosphate synthase subunit HisF strong 40 91
  Sphingobium sp. HT1-2 GFF3603 DNA methylase, putative cofit 46 81
  Cellulophaga baltica 18 M666_RS03040 leucine--tRNA ligase no data 40 80
  Rhodopseudomonas palustris CGA009 TX73_004600 endonuclease domain-containing protein insig. 41 86
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1402 Uncharacterized protein conserved in bacteria insig. 39 86
  Caulobacter crescentus NA1000 CCNA_00426 very-short-patch-repair endonuclease sig. 45 74
  Caulobacter crescentus NA1000 Δfur CCNA_00426 very-short-patch-repair endonuclease insig. 45 74
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00975 DUF559 domain-containing protein insig. 43 81
  Caulobacter crescentus NA1000 CCNA_02876 very short patch repair (Vsr) endonuclease insig. 42 93
  Caulobacter crescentus NA1000 Δfur CCNA_02876 very short patch repair (Vsr) endonuclease cofit 42 93
  Rhodopseudomonas palustris CGA009 TX73_005375 endonuclease domain-containing protein insig. 40 98
  Sphingobium sp. HT1-2 GFF2388 hypothetical protein insig. 42 88
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18475 DUF559 domain-containing protein insig. 41 78
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04790 endonuclease domain-containing protein insig. 41 83
  Sphingobium sp. HT1-2 GFF4762 Protein of unknown function DUF559 insig. 43 71
  Bosea sp. OAE506 ABIE41_RS08800 DUF559 domain-containing protein insig. 48 64
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03340 hypothetical protein no data 40 72
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS16190 endonuclease domain-containing protein insig. 43 81
  Sphingobium sp. HT1-2 GFF591 hypothetical protein cofit 42 75
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2603 Uncharacterized protein conserved in bacteria insig. 39 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24920 hypothetical protein insig. 36 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03335 cytosine methyltransferase no data 38 72
  Sphingobium sp. HT1-2 GFF1992 protein of unknown function DUF559 insig. 38 76
  Caulobacter crescentus NA1000 CCNA_02930 very short patch repair (Vsr) endonuclease insig. 47 70
  Caulobacter crescentus NA1000 Δfur CCNA_02930 very short patch repair (Vsr) endonuclease cofit 47 70
  Caulobacter crescentus NA1000 CCNA_02905 very short patch repair (Vsr) endonuclease sig. 40 73
  Caulobacter crescentus NA1000 Δfur CCNA_02905 very short patch repair (Vsr) endonuclease cofit 40 73
  Sphingobium sp. HT1-2 GFF3784 hypothetical protein cofit 45 50
  Pseudomonas aeruginosa MRSN321 DY961_RS00970 endonuclease domain-containing protein insig. 47 52
  Pseudomonas aeruginosa PUPa3 DQ20_RS60255 endonuclease domain-containing protein insig. 45 52
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS17525 DUF559 domain-containing protein insig. 35 70
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18825 hypothetical protein insig. 26 88
  Rhodopseudomonas palustris CGA009 TX73_019850 TrmJ/YjtD family RNA methyltransferase insig. 34 68
  Synechocystis sp000284455 PCC 6803 SGL_RS19135 endonuclease domain-containing protein no data 44 46
  Klebsiella pneumoniae MRSN742743 KFA93_RS26275 DUF559 domain-containing protein insig. 58 31
  Sinorhizobium meliloti 1021 SMc05003 hypothetical protein no data 46 29