Homologs of PS417_15890 from Pseudomonas simiae WCS417

RNA polymerase sigma factor
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_15890 RNA polymerase sigma factor sig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS17705 sigma-70 family RNA polymerase sigma factor insig. 98 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17705 sigma-70 family RNA polymerase sigma factor sig. 98 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4581 RNA polymerase sigma-70 factor, ECF subfamily no data 73 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3357 RNA polymerase sigma-70 factor, ECF subfamily insig. 71 98
o Pseudomonas sp. BP01 JOY50_RS01650 sigma-70 family RNA polymerase sigma factor insig. 68 97
o Pectobacterium carotovorum WPP14 HER17_RS18100 sigma-70 family RNA polymerase sigma factor cofit 55 94
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 56 96
  Pseudomonas segetis P6 MPMX49_02232 putative RNA polymerase sigma factor FecI insig. 58 87
o Pseudomonas putida KT2440 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily insig. 50 92
  Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 58 85
o Rahnella sp. WP5 EX31_RS16485 sigma-70 family RNA polymerase sigma factor insig. 50 90
  Dickeya dadantii 3937 DDA3937_RS03525 sigma-70 family RNA polymerase sigma factor insig. 54 88
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 55 85
  Pectobacterium carotovorum WPP14 HER17_RS17615 sigma-70 family RNA polymerase sigma factor insig. 49 91
  Pseudomonas aeruginosa PA14 IKLFDK_09340 RNA polymerase subunit sigma no data 52 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3565 heme uptake regulator insig. 47 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00175 putative RNA polymerase sigma factor FecI cofit 52 89
  Klebsiella pneumoniae MKP103 KDGMDA_00205 RNA polymerase sigma factor FecI insig. 48 94
  Variovorax sp. SCN45 GFF2431 RNA polymerase ECF-type sigma factor insig. 50 88
  Variovorax sp. SCN45 GFF5284 RNA polymerase ECF-type sigma factor insig. 53 87
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 48 96
  Pseudomonas sp. DMC3 GFF2735 putative RNA polymerase sigma factor FecI cofit 47 93
  Pseudomonas fluorescens SBW25 PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 49 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 49 94
  Cupriavidus basilensis FW507-4G11 RR42_RS28810 RNA polymerase sigma factor no data 53 85
  Pseudomonas sp. BP01 JOY50_RS26985 sigma-70 family RNA polymerase sigma factor insig. 51 91
  Variovorax sp. SCN45 GFF5858 heme uptake regulator insig. 51 85
  Pseudomonas simiae WCS417 PS417_28525 RNA polymerase sigma factor insig. 48 94
o Methylophilus sp. DMC18 GFF1981 putative RNA polymerase sigma factor FecI insig. 50 88
  Pseudomonas syringae pv. syringae B728a Psyr_2580 Sigma-70 region 2 no data 49 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2580 Sigma-70 region 2 insig. 49 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2098 heme uptake regulator insig. 44 94
  Pseudomonas sp. BP01 JOY50_RS26335 sigma-70 family RNA polymerase sigma factor insig. 51 85
  Dechlorosoma suillum PS Dsui_2948 RNA polymerase sigma factor, sigma-70 family insig. 51 89
  Pseudomonas fluorescens FW300-N2C3 AO356_26280 RNA polymerase subunit sigma insig. 49 90
  Escherichia coli BL21 ECD_04159 RNA polymerase sigma-19 factor, fec operon-specific; ECF sigma factor insig. 47 94
  Escherichia coli Nissle 1917 ECOLIN_RS25750 RNA polymerase sigma factor FecI insig. 47 94
  Escherichia coli BW25113 b4293 fecI KpLE2 phage-like element; RNA polymerase, sigma 19 factor (NCBI) strong 47 94
  Pseudomonas sp. SVBP6 COO64_RS10870 sigma-70 family RNA polymerase sigma factor insig. 47 95
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 45 94
  Pseudomonas sp. DMC3 GFF570 putative RNA polymerase sigma factor FecI cofit 48 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02444 putative RNA polymerase sigma factor FecI cofit 48 87
  Escherichia coli ECOR38 HEPCGN_09830 fecI RNA polymerase sigma factor FecI insig. 47 94
  Pseudomonas fluorescens SBW25 PFLU_RS17395 sigma-70 family RNA polymerase sigma factor insig. 48 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17395 sigma-70 family RNA polymerase sigma factor strong 48 91
  Pseudomonas fluorescens SBW25 PFLU_RS13600 sigma-70 family RNA polymerase sigma factor insig. 47 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13600 sigma-70 family RNA polymerase sigma factor insig. 47 93
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 51 85
  Pseudomonas sp. BP01 JOY50_RS19840 sigma-70 family RNA polymerase sigma factor no data 49 88
  Pseudomonas putida KT2440 PP_3086 putative RNA polymerase sigma-70 factor insig. 48 92
  Pseudomonas sp. SVBP6 COO64_RS11370 sigma-70 family RNA polymerase sigma factor insig. 49 89
  Pseudomonas sp. BP01 JOY50_RS02515 sigma-70 family RNA polymerase sigma factor insig. 48 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6050 RNA polymerase sigma-70 factor, ECF subfamily insig. 47 90
  Pseudomonas simiae WCS417 PS417_12935 RNA polymerase sigma factor insig. 46 93
  Herbaspirillum seropedicae SmR1 HSERO_RS22395 RNA polymerase sigma factor insig. 52 85
  Pseudomonas sp. RS175 PFR28_01871 putative RNA polymerase sigma factor FecI sig. 48 90
  Pseudomonas fluorescens FW300-N2C3 AO356_28820 RNA polymerase subunit sigma insig. 47 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1682 RNA polymerase sigma-70 factor, ECF subfamily insig. 47 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02847 putative RNA polymerase sigma factor FecI no data 47 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4818 RNA polymerase sigma-70 factor, ECF subfamily insig. 48 87
  Pseudomonas sp. DMC3 GFF1889 putative RNA polymerase sigma factor FecI cofit 47 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 48 90
  Variovorax sp. SCN45 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 50 85
  Klebsiella michiganensis M5al BWI76_RS11395 RNA polymerase sigma factor FecI strong 46 96
  Variovorax sp. SCN45 GFF723 RNA polymerase ECF-type sigma factor insig. 50 87
  Pseudomonas sp. BP01 JOY50_RS26950 sigma-70 family RNA polymerase sigma factor insig. 47 91
  Pseudomonas aeruginosa PA14 IKLFDK_20100 RNA polymerase subunit sigma insig. 50 88
  Pseudomonas fluorescens SBW25 PFLU_RS05170 sigma-70 family RNA polymerase sigma factor insig. 47 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05170 sigma-70 family RNA polymerase sigma factor strong 47 90
  Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 47 92
  Pseudomonas fluorescens FW300-N2C3 AO356_16910 RNA polymerase subunit sigma insig. 48 85
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01226 putative RNA polymerase sigma factor FecI cofit 48 90
  Pseudomonas sp. BP01 JOY50_RS04635 sigma-70 family RNA polymerase sigma factor insig. 55 86
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 48 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3991 RNA polymerase sigma-70 factor, ECF subfamily insig. 53 89
  Pseudomonas sp. SVBP6 COO64_RS15350 sigma-70 family RNA polymerase sigma factor insig. 49 87
  Pseudomonas aeruginosa PA14 IKLFDK_23065 RNA polymerase sigma factor insig. 47 92
  Variovorax sp. SCN45 GFF1524 FIG006045: Sigma factor, ECF subfamily insig. 43 89
  Pseudomonas sp. DMC3 GFF4294 putative RNA polymerase sigma factor FecI insig. 52 89
  Pseudomonas putida KT2440 PP_3577 RNA polymerase, sigma 19 factor insig. 47 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 47 85
  Pseudomonas putida KT2440 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily sig. 44 93
  Pseudomonas sp. BP01 JOY50_RS07315 sigma-70 family RNA polymerase sigma factor insig. 47 90
  Pseudomonas simiae WCS417 PS417_05100 RNA polymerase sigma factor sig. 47 85
  Pseudomonas sp. RS175 PFR28_00037 putative RNA polymerase sigma factor FecI insig. 48 85
  Pseudomonas sp. BP01 JOY50_RS10200 sigma-70 family RNA polymerase sigma factor insig. 50 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS15135 sigma-70 family RNA polymerase sigma factor insig. 48 85
  Pseudomonas fluorescens FW300-N2C3 AO356_10620 RNA polymerase subunit sigma insig. 51 89
  Pseudomonas segetis P6 MPMX49_03224 putative RNA polymerase sigma factor FecI insig. 47 87
  Pseudomonas sp. RS175 PFR28_04775 putative RNA polymerase sigma factor FecI insig. 48 94
  Pectobacterium carotovorum WPP14 HER17_RS21290 sigma-70 family RNA polymerase sigma factor insig. 45 91
  Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 47 89
  Pseudomonas sp. BP01 JOY50_RS22200 sigma-70 family RNA polymerase sigma factor insig. 47 86
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 46 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 46 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.715.1 RNA polymerase sigma factor insig. 50 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 48 85
  Pseudomonas syringae pv. syringae B728a Psyr_1040 RNA polymerase sigma factor, ECF subfamily strong 48 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1040 RNA polymerase sigma factor, ECF subfamily insig. 48 85