Homologs of PS417_09740 from Pseudomonas simiae WCS417

RNA polymerase subunit sigma-24
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 100 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 84 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 82 99
o Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 84 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 83 98
o Pseudomonas sp. DMC3 GFF1353 putative RNA polymerase sigma factor FecI cofit 81 96
o Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 81 98
o Pseudomonas sp. SVBP6 COO64_RS04025 sigma-70 family RNA polymerase sigma factor insig. 74 95
o Pseudomonas sp. BP01 JOY50_RS22705 RNA polymerase sigma factor insig. 74 94
o Pseudomonas putida KT2440 PP_0865 ECF subfamily RNA polymerase sigma-24 factor insig. 74 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 43 89
  Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 44 89
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 44 89
  Pseudomonas sp. SVBP6 COO64_RS18805 sigma-70 family RNA polymerase sigma factor insig. 42 89
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 42 89
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 42 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 42 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 42 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 41 89
  Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 41 89
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 42 89
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 40 91
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 40 89
  Pseudomonas sp. BP01 JOY50_RS12755 sigma-70 family RNA polymerase sigma factor insig. 37 91
  Pseudomonas aeruginosa PA14 IKLFDK_11700 pyoverdine signaling pathway sigma factor FpvI sig. 41 89
  Pseudomonas sp. BP01 JOY50_RS02475 sigma-70 family RNA polymerase sigma factor no data 39 92
  Pseudomonas sp. BP01 JOY50_RS18970 sigma-70 family RNA polymerase sigma factor insig. 36 94
  Pseudomonas putida KT2440 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein insig. 33 96
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 36 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 36 94
  Dickeya dadantii 3937 DDA3937_RS03525 sigma-70 family RNA polymerase sigma factor insig. 37 87
  Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 36 89
  Cupriavidus basilensis FW507-4G11 RR42_RS28810 RNA polymerase sigma factor no data 35 88
  Variovorax sp. SCN45 GFF4261 RNA polymerase ECF-type sigma factor insig. 35 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00175 putative RNA polymerase sigma factor FecI cofit 35 90
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 30 92
  Variovorax sp. SCN45 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 35 91
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 35 94
  Pseudomonas fluorescens SBW25 PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 35 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 35 87
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 33 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 33 96
  Ralstonia solanacearum PSI07 RPSI07_RS10560 RNA polymerase sigma factor insig. 35 97
  Pseudomonas sp. BP01 JOY50_RS26950 sigma-70 family RNA polymerase sigma factor insig. 36 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02444 putative RNA polymerase sigma factor FecI cofit 36 83
  Pseudomonas segetis P6 MPMX49_03224 putative RNA polymerase sigma factor FecI insig. 36 87
  Pseudomonas segetis P6 MPMX49_00743 putative RNA polymerase sigma factor FecI insig. 35 88
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 31 92
  Ralstonia solanacearum GMI1000 RS_RS14615 RNA polymerase sigma factor insig. 36 90
  Ralstonia solanacearum GMI1000 RS_RS19160 RNA polymerase sigma factor sig. 34 88
  Ralstonia solanacearum PSI07 RPSI07_RS01670 RNA polymerase sigma factor insig. 34 88
  Pseudomonas sp. SVBP6 COO64_RS08375 sigma-70 family RNA polymerase sigma factor insig. 34 89
  Pseudomonas sp. BP01 JOY50_RS22945 sigma-70 family RNA polymerase sigma factor insig. 36 96
  Pseudomonas sp. BP01 JOY50_RS11985 RNA polymerase sigma factor insig. 35 89
  Ralstonia solanacearum PSI07 RPSI07_RS03580 RNA polymerase sigma factor insig. 35 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19630 RNA polymerase sigma factor sig. 35 87
  Ralstonia solanacearum UW163 UW163_RS19545 RNA polymerase sigma factor insig. 35 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4818 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 83
  Pseudomonas simiae WCS417 PS417_28525 RNA polymerase sigma factor insig. 34 87
  Pseudomonas sp. BP01 JOY50_RS26335 sigma-70 family RNA polymerase sigma factor insig. 36 88
  Pseudomonas sp. SVBP6 COO64_RS16360 RNA polymerase sigma factor sig. 33 93
  Methylophilus sp. DMC18 GFF1870 hypothetical protein insig. 34 86
  Pseudomonas sp. BP01 JOY50_RS12920 RNA polymerase sigma factor insig. 34 93
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 33 89
  Pseudomonas sp. DMC3 GFF570 putative RNA polymerase sigma factor FecI cofit 36 87
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 32 88
  Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 38 83
  Pseudomonas aeruginosa PA14 IKLFDK_20100 RNA polymerase subunit sigma insig. 37 87
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma insig. 37 89
  Pseudomonas sp. DMC3 GFF2767 putative RNA polymerase sigma factor FecI insig. 36 86
  Acinetobacter baumannii LAC-4 RR41_RS08490 sigma-70 family RNA polymerase sigma factor strong 33 87
  Pseudomonas sp. BP01 JOY50_RS02515 sigma-70 family RNA polymerase sigma factor insig. 31 90
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 32 89
  Azospirillum brasilense Sp245 AZOBR_RS23325 RNA polymerase sigma70 insig. 34 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21465 RNA polymerase sigma factor insig. 32 90
  Ralstonia solanacearum UW163 UW163_RS17725 RNA polymerase sigma factor insig. 32 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06665 RNA polymerase sigma factor insig. 32 97
  Ralstonia solanacearum UW163 UW163_RS06960 RNA polymerase sigma factor insig. 32 97
  Ralstonia solanacearum GMI1000 RS_RS21190 RNA polymerase sigma factor cofit 34 87
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 32 89
  Pseudomonas sp. SVBP6 COO64_RS10870 sigma-70 family RNA polymerase sigma factor insig. 31 89
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 31 92
  Pseudomonas sp. BP01 JOY50_RS19220 RNA polymerase sigma factor insig. 34 89
  Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 32 91
  Methylophilus sp. DMC18 GFF1078 hypothetical protein insig. 32 87
  Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 31 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 31 91
  Caulobacter crescentus NA1000 CCNA_01032 RNA polymerase ECF-type sigma factor cofit 38 78
  Caulobacter crescentus NA1000 Δfur CCNA_01032 RNA polymerase ECF-type sigma factor cofit 38 78
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 36 87
  Pseudomonas sp. SVBP6 COO64_RS15350 sigma-70 family RNA polymerase sigma factor insig. 31 93
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02847 putative RNA polymerase sigma factor FecI no data 33 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3565 heme uptake regulator insig. 36 88
  Herbaspirillum seropedicae SmR1 HSERO_RS22395 RNA polymerase sigma factor insig. 33 88
  Pseudomonas fluorescens SBW25 PFLU_RS06940 sigma-70 family RNA polymerase sigma factor insig. 31 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06940 sigma-70 family RNA polymerase sigma factor sig. 31 96
  Pseudomonas sp. BP01 JOY50_RS22200 sigma-70 family RNA polymerase sigma factor insig. 36 80
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0778 RNA polymerase sigma factor, sigma-70 family insig. 34 84
  Rahnella sp. WP5 EX31_RS16485 sigma-70 family RNA polymerase sigma factor insig. 34 88
  Pseudomonas segetis P6 MPMX49_02232 putative RNA polymerase sigma factor FecI insig. 34 88