Homologs of EX28DRAFT_2109 from Enterobacter asburiae PDN3

Reverse transcriptase (RNA-dependent DNA polymerase)
SEED: Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)

72 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Enterobacter asburiae PDN3 EX28DRAFT_2109 Reverse transcriptase (RNA-dependent DNA polymerase) cofit 100 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1352 Retron-type reverse transcriptase insig. 42 98
o Escherichia coli BL21 ECD_00831 retron EC86 RNA-directed DNA polymerase-like protein sig. 31 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04565 hypothetical protein insig. 31 93
  Variovorax sp. SCN45 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) insig. 33 82
  Pseudomonas fluorescens SBW25 PFLU_RS30560 RNA-directed DNA polymerase insig. 30 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS30560 RNA-directed DNA polymerase insig. 30 80
  Bacteroides ovatus ATCC 8483 BACOVA_05160 reverse transcriptase (RNA-dependent DNA polymerase) insig. 31 83
  Dickeya dianthicola ME23 DZA65_RS02140 RNA-directed DNA polymerase insig. 32 80
  Bacteroides thetaiotaomicron VPI-5482 BT4342 RNA-directed DNA polymerase (NCBI ptt file) sig. 29 83
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.757.1 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) insig. 30 78
  Escherichia coli ECOR38 HEPCGN_14425 RNA-directed DNA polymerase insig. 29 78
  Pseudomonas simiae WCS417 PS417_20295 RNA-directed DNA polymerase insig. 29 80
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3003.1 hypothetical protein insig. 28 79
  Pseudomonas segetis P6 MPMX49_00499 hypothetical protein insig. 30 75
  Cellulophaga baltica 18 M666_RS15890 reverse transcriptase family protein insig. 28 77
  Burkholderia phytofirmans PsJN BPHYT_RS00090 reverse transcriptase insig. 30 63
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03575 hypothetical protein cofit 28 82
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1746 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no data 27 76
o Pectobacterium carotovorum WPP14 HER17_RS10435 retron St85 family RNA-directed DNA polymerase insig. 29 81
o Pseudomonas sp. BP01 JOY50_RS26315 retron St85 family RNA-directed DNA polymerase insig. 27 83
  Vibrio cholerae E7946 ATCC 55056 CSW01_12075 RNA-directed DNA polymerase insig. 31 57
  Acidovorax sp. GW101-3H11 Ac3H11_2124 Reverse transcriptase insig. 26 77
  Dickeya dianthicola 67-19 HGI48_RS00180 RNA-directed DNA polymerase insig. 28 76
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2149 Retron-type reverse transcriptase no data 29 47
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4041 Retron-type reverse transcriptase no data 29 47
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1015 Retron-type reverse transcriptase sig. 29 47
  Sinorhizobium meliloti 1021 SM_b21477 reverse transcriptasematurase no data 30 46
  Pseudomonas fluorescens FW300-N2E3 AO353_20735 group II intron reverse transcriptase/maturase no data 28 46
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01065 hypothetical protein no data 27 46
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01335 hypothetical protein no data 27 46
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01557 hypothetical protein no data 27 46
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02713 hypothetical protein no data 27 46
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03692 hypothetical protein no data 27 46
  Escherichia fergusonii Becca EFB2_00114 hypothetical protein insig. 25 57
  Pseudomonas fluorescens FW300-N2E3 AO353_00970 group II intron reverse transcriptase/maturase insig. 27 46
  Pseudomonas putida KT2440 PP_0635 Group II intron-encoding maturase no data 28 42
  Pseudomonas putida KT2440 PP_3868 Group II intron-encoding maturase no data 28 42
  Pseudomonas putida KT2440 PP_1846 Group II intron-encoding maturase no data 27 42
  Pseudomonas putida KT2440 PP_3172 Group II intron-encoding maturase no data 27 42
  Pseudomonas putida KT2440 PP_3820 Group II intron-encoding maturase no data 27 42
  Pseudomonas putida KT2440 PP_1250 Group II intron-encoding maturase no data 27 46
  Pseudomonas putida KT2440 PP_1252 Group II intron-encoding maturase no data 27 46
  Pseudomonas putida KT2440 PP_1624 Group II intron-encoding maturase no data 27 46
  Sinorhizobium meliloti 1021 SM_b21167 reverse transcriptasematurase insig. 30 46
  Herbaspirillum seropedicae SmR1 HSERO_RS14565 hypothetical protein insig. 30 33
  Bacteroides thetaiotaomicron VPI-5482 BT2617 reverse transcriptase (NCBI ptt file) insig. 29 46
  Alteromonas macleodii MIT1002 MIT1002_00571 Group II intron-encoded protein LtrA no data 24 71
  Klebsiella pneumoniae MKP103 KDGMDA_01115 group II intron reverse transcriptase/maturase no data 27 47
  Klebsiella pneumoniae MKP103 KDGMDA_15385 group II intron reverse transcriptase/maturase no data 27 47
  Klebsiella pneumoniae MKP103 KDGMDA_17440 group II intron reverse transcriptase/maturase no data 27 47
  Klebsiella pneumoniae MKP103 KDGMDA_19105 group II intron reverse transcriptase/maturase no data 27 47
  Klebsiella pneumoniae MKP103 KDGMDA_19855 group II intron reverse transcriptase/maturase no data 27 47
  Klebsiella pneumoniae MKP103 KDGMDA_26025 group II intron reverse transcriptase/maturase no data 27 47
  Alteromonas macleodii MIT1002 MIT1002_00568 Group II intron-encoded protein LtrA no data 24 71
  Alteromonas macleodii MIT1002 MIT1002_02239 Group II intron-encoded protein LtrA no data 24 71
  Sinorhizobium meliloti 1021 SM_b21045 reverse transcriptasematurase no data 25 61
  Sinorhizobium meliloti 1021 SM_b20780 reverse transcriptasematurase of intron RmInt1 protein no data 25 61
  Sinorhizobium meliloti 1021 SMa1801 Reverse transcriptase, maturase no data 25 61
  Rhodanobacter denitrificans MT42 LRK55_RS11725 group II intron reverse transcriptase/maturase no data 25 59
  Rhodanobacter denitrificans MT42 LRK55_RS11730 group II intron reverse transcriptase/maturase no data 25 59
  Bacteroides thetaiotaomicron VPI-5482 BT2455 reverse transcriptase/maturase family protein (NCBI ptt file) insig. 31 27
  Enterobacter sp. TBS_079 MPMX20_00585 hypothetical protein sig. 26 40
  Escherichia coli ECRC102 NIAGMN_28890 ltrA group II intron reverse transcriptase/maturase cofit 23 58
  Alteromonas macleodii MIT1002 MIT1002_03233 Group II intron-encoded protein LtrA insig. 25 55
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02275 reverse transcriptase/maturase family protein no data 25 44
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11000 reverse transcriptase/maturase family protein no data 25 44
  Variovorax sp. SCN45 GFF3411 hypothetical protein insig. 26 45
  Ralstonia solanacearum PSI07 RPSI07_RS10630 group II intron reverse transcriptase/maturase cofit 24 41
  Escherichia coli ECRC62 BNILDI_11590 reverse transcriptase insig. 24 53
  Phocaeicola dorei CL03T12C01 ABI39_RS16275 group II intron reverse transcriptase/maturase insig. 25 76
  Synechocystis sp000284455 PCC 6803 SGL_RS14525 reverse transcriptase domain-containing protein insig. 35 27