Homologs of DZA65_RS02140 from Dickeya dianthicola ME23

RNA-directed DNA polymerase
SEED: Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)

53 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dickeya dianthicola ME23 DZA65_RS02140 RNA-directed DNA polymerase insig. 100 100
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.757.1 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) insig. 32 65
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04565 hypothetical protein insig. 34 54
  Cellulophaga baltica 18 M666_RS15890 reverse transcriptase family protein insig. 33 55
  Dickeya dianthicola ME23 DZA65_RS08150 hypothetical protein insig. 36 40
  Variovorax sp. SCN45 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) insig. 29 49
  Escherichia coli BL21 ECD_00831 retron EC86 RNA-directed DNA polymerase-like protein sig. 32 51
  Bacteroides thetaiotaomicron VPI-5482 BT4342 RNA-directed DNA polymerase (NCBI ptt file) sig. 31 47
  Bacteroides ovatus ATCC 8483 BACOVA_05160 reverse transcriptase (RNA-dependent DNA polymerase) insig. 30 43
  Escherichia coli ECOR38 HEPCGN_14425 RNA-directed DNA polymerase insig. 29 42
  Burkholderia phytofirmans PsJN BPHYT_RS00090 reverse transcriptase insig. 31 40
  Enterobacter asburiae PDN3 EX28DRAFT_2109 Reverse transcriptase (RNA-dependent DNA polymerase) cofit 32 49
  Pseudomonas segetis P6 ACVTMO_RS02455 reverse transcriptase domain-containing protein insig. 31 39
  Acidovorax sp. GW101-3H11 Ac3H11_2124 Reverse transcriptase insig. 27 47
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS05055 reverse transcriptase family protein cofit 26 52
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1746 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no data 29 47
  Vibrio cholerae E7946 ATCC 55056 CSW01_12075 RNA-directed DNA polymerase insig. 29 50
  Klebsiella pneumoniae MRSN742743 KFA93_RS19280 reverse transcriptase family protein no data 26 52
  Dickeya dianthicola 67-19 HGI48_RS00180 RNA-directed DNA polymerase insig. 26 50
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03575 hypothetical protein cofit 29 40
  Kangiella aquimarina DSM 16071 B158DRAFT_1352 Retron-type reverse transcriptase insig. 32 34
  Pectobacterium carotovorum WPP14 HER17_RS10435 retron St85 family RNA-directed DNA polymerase insig. 26 45
  Pseudomonas sp. BP01 JOY50_RS26315 retron St85 family RNA-directed DNA polymerase insig. 27 42
  Pseudomonas simiae WCS417 PS417_20295 RNA-directed DNA polymerase insig. 24 51
  Herbaspirillum seropedicae SmR1 HSERO_RS14565 hypothetical protein insig. 25 41
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3003.1 hypothetical protein insig. 26 41
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1015 Retron-type reverse transcriptase sig. 28 31
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2149 Retron-type reverse transcriptase no data 28 31
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4041 Retron-type reverse transcriptase no data 28 31
  Pseudomonas fluorescens FW300-N2E3 AO353_20735 group II intron reverse transcriptase/maturase no data 32 20
  Sinorhizobium meliloti 1021 SM_b21477 reverse transcriptasematurase no data 26 29
  Sinorhizobium meliloti 1021 SM_b21167 reverse transcriptasematurase insig. 25 30
  Pseudomonas fluorescens SBW25 PFLU_RS30560 RNA-directed DNA polymerase insig. 23 41
  Pseudomonas fluorescens SBW25-INTG PFLU_RS30560 RNA-directed DNA polymerase insig. 23 41
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01065 hypothetical protein no data 29 20
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01335 hypothetical protein no data 29 20
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01557 hypothetical protein no data 29 20
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02713 hypothetical protein no data 29 20
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03692 hypothetical protein no data 29 20
  Pseudomonas fluorescens FW300-N2E3 AO353_00970 group II intron reverse transcriptase/maturase insig. 31 20
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04374 RNA-directed DNA polymerase (EC 2.7.7.49) insig. 24 33
  Variovorax sp. SCN45 GFF3411 hypothetical protein insig. 24 34
  Paraburkholderia graminis OAS925 ABIE53_001577 RNA-directed DNA polymerase insig. 25 33
  Alteromonas macleodii MIT1002 MIT1002_00571 Group II intron-encoded protein LtrA no data 27 27
  Alteromonas macleodii MIT1002 MIT1002_00568 Group II intron-encoded protein LtrA no data 27 27
  Alteromonas macleodii MIT1002 MIT1002_02239 Group II intron-encoded protein LtrA no data 27 27
  Paraburkholderia sabiae LMG 24235 QEN71_RS27035 group II intron reverse transcriptase/maturase insig. 27 29
  Phocaeicola dorei CL03T12C01 ABI39_RS16275 group II intron reverse transcriptase/maturase insig. 27 30
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3329 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) insig. 24 35
  Paraburkholderia graminis OAS925 ABIE53_003604 RNA-directed DNA polymerase insig. 27 29
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS05955 reverse transcriptase family protein cofit 31 15
  Enterobacter sp. TBS_079 MPMX20_00585 hypothetical protein sig. 26 21
  Bacteroides thetaiotaomicron VPI-5482 BT2617 reverse transcriptase (NCBI ptt file) insig. 25 36