Homologs of CSW01_12075 from Vibrio cholerae E7946 ATCC 55056

RNA-directed DNA polymerase
SEED: Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)
KEGG: RNA-directed DNA polymerase

52 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_12075 RNA-directed DNA polymerase insig. 100 100
o Pectobacterium carotovorum WPP14 HER17_RS10435 retron St85 family RNA-directed DNA polymerase insig. 49 91
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1746 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no data 48 96
o Dickeya dianthicola 67-19 HGI48_RS00180 RNA-directed DNA polymerase insig. 46 87
o Pseudomonas sp. BP01 JOY50_RS26315 retron St85 family RNA-directed DNA polymerase insig. 42 94
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03575 hypothetical protein cofit 36 86
  Bacteroides ovatus ATCC 8483 BACOVA_05160 reverse transcriptase (RNA-dependent DNA polymerase) insig. 28 81
  Escherichia coli ECOR38 HEPCGN_14425 RNA-directed DNA polymerase insig. 31 72
  Dickeya dianthicola ME23 DZA65_RS02140 RNA-directed DNA polymerase insig. 29 84
o Pseudomonas segetis P6 MPMX49_00499 hypothetical protein insig. 30 80
  Bacteroides thetaiotaomicron VPI-5482 BT4342 RNA-directed DNA polymerase (NCBI ptt file) sig. 28 81
o Escherichia coli BL21 ECD_00831 retron EC86 RNA-directed DNA polymerase-like protein sig. 28 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04565 hypothetical protein insig. 30 72
  Cellulophaga baltica 18 M666_RS15890 reverse transcriptase family protein insig. 30 73
  Variovorax sp. SCN45 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) insig. 27 79
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.757.1 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) insig. 31 55
  Pseudomonas simiae WCS417 PS417_20295 RNA-directed DNA polymerase insig. 25 82
  Kangiella aquimarina DSM 16071 B158DRAFT_1352 Retron-type reverse transcriptase insig. 27 76
  Acidovorax sp. GW101-3H11 Ac3H11_2124 Reverse transcriptase insig. 21 86
  Enterobacter asburiae PDN3 EX28DRAFT_2109 Reverse transcriptase (RNA-dependent DNA polymerase) cofit 31 60
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3003.1 hypothetical protein insig. 25 82
  Burkholderia phytofirmans PsJN BPHYT_RS00090 reverse transcriptase insig. 25 71
  Pseudomonas fluorescens SBW25 PFLU_RS30560 RNA-directed DNA polymerase insig. 30 61
  Pseudomonas fluorescens SBW25-INTG PFLU_RS30560 RNA-directed DNA polymerase insig. 30 61
  Bacteroides thetaiotaomicron VPI-5482 BT2615 reverse transcriptase (NCBI ptt file) insig. 27 60
  Rhodanobacter denitrificans MT42 LRK55_RS11725 group II intron reverse transcriptase/maturase no data 27 51
  Rhodanobacter denitrificans MT42 LRK55_RS11730 group II intron reverse transcriptase/maturase no data 27 51
  Sinorhizobium meliloti 1021 SM_b21167 reverse transcriptasematurase insig. 26 61
  Sinorhizobium meliloti 1021 SM_b21477 reverse transcriptasematurase no data 26 61
  Ralstonia solanacearum PSI07 RPSI07_RS08925 group II intron reverse transcriptase/maturase insig. 28 63
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1015 Retron-type reverse transcriptase sig. 25 60
  Herbaspirillum seropedicae SmR1 HSERO_RS14565 hypothetical protein insig. 23 88
  Enterobacter sp. TBS_079 MPMX20_00585 hypothetical protein sig. 26 64
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2149 Retron-type reverse transcriptase no data 25 60
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4041 Retron-type reverse transcriptase no data 25 60
  Pseudomonas putida KT2440 PP_1250 Group II intron-encoding maturase no data 23 69
  Pseudomonas putida KT2440 PP_1252 Group II intron-encoding maturase no data 23 69
  Pseudomonas putida KT2440 PP_1624 Group II intron-encoding maturase no data 23 69
  Pseudomonas putida KT2440 PP_1846 Group II intron-encoding maturase no data 23 69
  Pseudomonas putida KT2440 PP_3172 Group II intron-encoding maturase no data 23 69
  Pseudomonas putida KT2440 PP_3820 Group II intron-encoding maturase no data 23 69
  Pseudomonas putida KT2440 PP_0635 Group II intron-encoding maturase no data 23 69
  Pseudomonas putida KT2440 PP_3868 Group II intron-encoding maturase no data 23 69
  Alteromonas macleodii MIT1002 MIT1002_00568 Group II intron-encoded protein LtrA no data 23 50
  Alteromonas macleodii MIT1002 MIT1002_00571 Group II intron-encoded protein LtrA no data 23 50
  Alteromonas macleodii MIT1002 MIT1002_02239 Group II intron-encoded protein LtrA no data 23 50
  Pseudomonas fluorescens FW300-N2E3 AO353_20735 group II intron reverse transcriptase/maturase no data 21 61
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS18005 reverse transcriptase/maturase family protein insig. 25 45
  Azospirillum sp. SherDot2 MPMX19_01315 hypothetical protein cofit 32 28
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4486 Retron-type reverse transcriptase insig. 24 53
  Pseudomonas fluorescens FW300-N2E3 AO353_00970 group II intron reverse transcriptase/maturase insig. 21 61
  Phocaeicola dorei CL03T12C01 ABI39_RS16290 reverse transcriptase/maturase family protein insig. 26 45