Homologs of Sama_0993 from Shewanella amazonensis SB2B

ligand-binding sensor domain-containing protein (RefSeq)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_0993 ligand-binding sensor domain-containing protein (RefSeq) insig. 100 100
o Shewanella loihica PV-4 Shew_2791 PAS/PAC sensor signal transduction histidine kinase (RefSeq) insig. 47 98
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 26 77
  Desulfovibrio vulgaris Hildenborough JW710 DVU0721 sensory box histidine kinase (TIGR) insig. 38 33
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4346 Signal transduction histidine kinase insig. 28 65
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 25 76
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 26 77
  Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 27 74
  Bacteroides thetaiotaomicron VPI-5482 BT2923 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 27 67
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3754 Signal transduction histidine kinase insig. 25 65
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06780 hybrid sensor histidine kinase/response regulator insig. 27 64
  Desulfovibrio vulgaris Hildenborough JW710 DVU2079 sensory box histidine kinase (TIGR) insig. 33 35
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11130 two-component regulator propeller domain-containing protein cofit 27 67
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08780 hybrid sensor histidine kinase/response regulator transcription factor insig. 25 65
  Cellulophaga baltica 18 M666_RS00005 two-component regulator propeller domain-containing protein insig. 25 65
  Shewanella oneidensis MR-1 SO3162 sensor histidine kinase (NCBI ptt file) insig. 42 24
  Alteromonas macleodii MIT1002 MIT1002_00234 Sensor protein ZraS sig. 44 23
  Azospirillum brasilense Sp245 AZOBR_RS06840 hypothetical protein insig. 44 22
  Azospirillum brasilense Sp245 AZOBR_RS14320 histidine kinase insig. 42 21
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06050 hypothetical protein insig. 25 63
  Alteromonas macleodii MIT1002 MIT1002_01290 Bacteriophytochrome cph2 cofit 24 75
  Alteromonas macleodii MIT1002 MIT1002_00750 Sensor kinase protein RcsC insig. 43 23
  Phocaeicola dorei CL03T12C01 ABI39_RS00165 response regulator strong 25 67
  Bacteroides thetaiotaomicron VPI-5482 BT3049 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) cofit 26 64
  Azospirillum brasilense Sp245 AZOBR_RS09195 histidine kinase strong 40 24
  Azospirillum sp. SherDot2 MPMX19_05988 Adaptive-response sensory-kinase SasA insig. 34 33
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14215 hypothetical protein insig. 24 65
  Rhodospirillum rubrum S1H Rru_A0438 Multi-sensor Signal Transduction Histidine Kinase (NCBI) insig. 42 21
  Rhodopseudomonas palustris CGA009 TX73_016485 PAS domain S-box protein insig. 35 28
  Bacteroides thetaiotaomicron VPI-5482 BT4663 two-component system sensor histidine kinase/response (NCBI ptt file) strong 23 68
  Shewanella sp. ANA-3 Shewana3_1390 GAF sensor signal transduction histidine kinase (RefSeq) insig. 40 24
  Vibrio cholerae E7946 ATCC 55056 CSW01_15040 ATP-binding protein insig. 33 34
  Azospirillum brasilense Sp245 AZOBR_RS27780 putative histidine kinase insig. 40 22
  Bacteroides ovatus ATCC 8483 BACOVA_04394 response regulator receiver domain protein strong 24 67
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11200 hybrid sensor histidine kinase/response regulator transcription factor insig. 24 62
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00710 hypothetical protein insig. 23 65
  Magnetospirillum magneticum AMB-1 AMB_RS23720 HAMP domain-containing protein insig. 35 28
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14910 helix-turn-helix domain-containing protein insig. 24 64
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2760 Signal transduction histidine kinase insig. 23 67
  Phocaeicola dorei CL03T12C01 ABI39_RS03955 response regulator insig. 24 68
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09500 response regulator insig. 24 68
  Rhodospirillum rubrum S1H Rru_A2516 Multi-sensor Signal Transduction Histidine Kinase (NCBI) insig. 40 21
  Phocaeicola dorei CL03T12C01 ABI39_RS10630 helix-turn-helix domain-containing protein insig. 24 64
  Bacteroides ovatus ATCC 8483 BACOVA_02667 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein insig. 24 67
  Bacteroides stercoris CC31F HMPREF1181_RS08545 response regulator insig. 24 65
  Rhodospirillum rubrum S1H Rru_A2473 PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) insig. 43 21
  Bacteroides thetaiotaomicron VPI-5482 BT3465 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 25 63
  Cellulophaga baltica 18 M666_RS09795 two-component regulator propeller domain-containing protein insig. 24 65
  Bacteroides ovatus ATCC 8483 BACOVA_03437 response regulator receiver domain protein strong 23 66
  Rhodopseudomonas palustris CGA009 TX73_024890 HAMP domain-containing sensor histidine kinase sig. 42 21
  Phocaeicola dorei CL03T12C01 ABI39_RS10925 response regulator insig. 24 68
  Azospirillum sp. SherDot2 MPMX19_03980 Sensor protein FixL insig. 38 22
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15170 response regulator insig. 24 68
  Cupriavidus basilensis FW507-4G11 RR42_RS12400 histidine kinase insig. 42 21
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07305 hybrid sensor histidine kinase/response regulator transcription factor insig. 23 67
  Azospirillum sp. SherDot2 MPMX19_05237 Sensor histidine kinase RcsC insig. 38 22
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13495 hybrid sensor histidine kinase/response regulator transcription factor insig. 23 66
  Bacteroides ovatus ATCC 8483 BACOVA_01840 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein cofit 24 65
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02180 two-component regulator propeller domain-containing protein insig. 23 66
  Bacteroides ovatus ATCC 8483 BACOVA_02857 conserved hypothetical protein TIGR03982 insig. 23 67
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11185 response regulator insig. 25 65
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07185 two-component regulator propeller domain-containing protein insig. 25 65
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02485 hypothetical protein insig. 24 64
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15155 hybrid sensor histidine kinase/response regulator transcription factor cofit 24 66
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10265 hypothetical protein insig. 25 65
  Cellulophaga baltica 18 M666_RS18150 sensor histidine kinase insig. 23 66
  Phocaeicola dorei CL03T12C01 ABI39_RS05860 response regulator insig. 25 65
  Magnetospirillum magneticum AMB-1 AMB_RS17455 histidine kinase insig. 39 24
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4259 His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Y_Y_Y domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Two component regulator propeller./Bacterial regulatory helix-turn-helix proteins, AraC family. insig. 25 67
  Bacteroides stercoris CC31F HMPREF1181_RS06690 response regulator sig. 24 64
  Azospirillum sp. SherDot2 MPMX19_04229 Adaptive-response sensory-kinase SasA insig. 38 24
  Azospirillum sp. SherDot2 MPMX19_00498 Sensor histidine kinase RcsC insig. 40 22
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1645 Signal transduction histidine kinase insig. 26 54
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08500 hybrid sensor histidine kinase/response regulator transcription factor strong 22 66
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11205 hybrid sensor histidine kinase/response regulator insig. 24 65
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12625 hybrid sensor histidine kinase/response regulator transcription factor strong 24 66
  Bacteroides thetaiotaomicron VPI-5482 BT2897 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) insig. 23 66
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15110 response regulator insig. 24 66
  Azospirillum brasilense Sp245 AZOBR_RS16770 histidine kinase insig. 36 26
  Azospirillum brasilense Sp245 AZOBR_RS22690 sensor protein insig. 33 28
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08910 response regulator insig. 24 65
  Bacteroides thetaiotaomicron VPI-5482 BT2860 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) insig. 24 67
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01485 hypothetical protein insig. 23 67
  Alteromonas macleodii MIT1002 MIT1002_01199 Bacteriophytochrome cph2 insig. 24 76
  Azospirillum sp. SherDot2 MPMX19_01437 Adaptive-response sensory-kinase SasA insig. 42 20
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13565 hybrid sensor histidine kinase/response regulator transcription factor insig. 22 65
  Phocaeicola dorei CL03T12C01 ABI39_RS03030 response regulator insig. 24 67
  Cellulophaga baltica 18 M666_RS18760 sensor histidine kinase insig. 22 73
  Alteromonas macleodii MIT1002 MIT1002_02466 Sensor protein ZraS insig. 36 23
  Bacteroides ovatus ATCC 8483 BACOVA_05479 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein insig. 22 64
  Azospirillum sp. SherDot2 MPMX19_00962 Adaptive-response sensory-kinase SasA insig. 36 23
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19195 hypothetical protein insig. 25 65
  Shewanella amazonensis SB2B Sama_2082 Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein (RefSeq) insig. 34 25
  Phocaeicola dorei CL03T12C01 ABI39_RS02675 response regulator insig. 23 67
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12385 two-component regulator propeller domain-containing protein insig. 22 67
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08450 response regulator strong 23 67
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0504 Signal transduction histidine kinase insig. 23 67
  Phocaeicola dorei CL03T12C01 ABI39_RS04050 helix-turn-helix domain-containing protein insig. 25 56
  Bacteroides ovatus ATCC 8483 BACOVA_02182 response regulator receiver domain protein cofit 25 48
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00820 response regulator no data 23 65