Homologs of Dshi_1195 from Dinoroseobacter shibae DFL-12
TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, solute receptor component (from data)
Original annotation: TRAP transporter solute receptor, TAXI family (RefSeq)
SEED: TRAP transporter solute receptor, TAXI family precursor
36 hits from BLASTp (E < 0.01)
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| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Dinoroseobacter shibae DFL-12 | Dshi_1195 | | TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, solute receptor component (from data) | strong | 100 | 100 |
| o | Marinobacter adhaerens HP15 | HP15_722 | | TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, solute receptor component (from data) | strong | 71 | 98 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0645 | | TRAP transporter solute receptor, TAXI family (RefSeq) | insig. | 26 | 95 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_14730 | | C4-dicarboxylate ABC transporter substrate-binding protein | insig. | 27 | 99 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_02255 | | C4-dicarboxylate ABC transporter substrate-binding protein | cofit | 24 | 92 |
| | Xanthobacter sp. DMC5 | GFF4730 | | hypothetical protein | insig. | 25 | 85 |
| | Serratia liquefaciens MT49 | IAI46_10125 | | TAXI family TRAP transporter solute-binding subunit | insig. | 26 | 89 |
| | Sinorhizobium meliloti 1021 | SM_b20292 | | immunogenic protein | insig. | 24 | 93 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS04535 | | C4-dicarboxylate ABC transporter | insig. | 22 | 87 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS12545 | | TAXI family TRAP transporter solute-binding subunit | cofit | 22 | 85 |
| | Marinobacter adhaerens HP15 | HP15_1069 | | TRAP transporter solute receptor, TAXI family protein | strong | 22 | 85 |
| | Pseudomonas segetis P6 | MPMX49_00214 | | hypothetical protein | sig. | 22 | 86 |
| | Bosea sp. OAE506 | ABIE41_RS03165 | | TAXI family TRAP transporter solute-binding subunit | insig. | 24 | 86 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c16180 | | TRAP transporter solute receptor, TAXI family | strong | 23 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25685 | | C4-dicarboxylate ABC transporter | insig. | 22 | 87 |
| | Pseudomonas putida KT2440 | PP_3954 | | periplasmic binding subunit of unknown solute | insig. | 21 | 87 |
| | Shewanella sp. ANA-3 | Shewana3_0457 | | response regulator receiver protein (RefSeq) | cofit | 22 | 84 |
| | Shewanella oneidensis MR-1 | SO0456 | | immunogenic-related protein (NCBI ptt file) | strong | 21 | 92 |
| | Pseudomonas sp. DMC3 | GFF1143 | | hypothetical protein | cofit | 21 | 87 |
| | Pseudomonas stutzeri RCH2 | Psest_0198 | | TRAP transporter solute receptor, TAXI family | cofit | 20 | 95 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4037 | | TRAP transporter solute receptor, TAXI family precursor | insig. | 22 | 85 |
| | Rhodopseudomonas palustris CGA009 | TX73_023420 | | TAXI family TRAP transporter solute-binding subunit | insig. | 21 | 85 |
| | Azospirillum brasilense Sp245 | AZOBR_RS16505 | | hypothetical protein | sig. | 21 | 90 |
| | Pseudomonas stutzeri RCH2 | Psest_0085 | | alpha-ketoglutarate TRAP transporter, solute receptor component (from data) | strong | 20 | 85 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1443 | | TRAP transporter solute receptor, TAXI family (RefSeq) | sig. | 23 | 86 |
| | Pseudomonas sp. RS175 | PFR28_02585 | | hypothetical protein | insig. | 22 | 93 |
| | Pseudomonas segetis P6 | MPMX49_00291 | | hypothetical protein | sig. | 21 | 95 |
| | Azospirillum sp. SherDot2 | MPMX19_05255 | | hypothetical protein | insig. | 22 | 86 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_321 | | TRAP transporter solute receptor, unknown substrate 1 | insig. | 20 | 90 |
| | Pseudomonas stutzeri RCH2 | Psest_2117 | | TRAP transporter solute receptor, TAXI family | insig. | 22 | 95 |
| | Azospirillum brasilense Sp245 | AZOBR_RS03765 | | hypothetical protein | strong | 21 | 85 |
| | Rhodospirillum rubrum S1H | Rru_A0137 | | TRAP transporter solute receptor, TAXI family (NCBI) | strong | 20 | 96 |
| | Bosea sp. OAE506 | ABIE41_RS05845 | | TAXI family TRAP transporter solute-binding subunit | insig. | 22 | 86 |
| | Azospirillum sp. SherDot2 | MPMX19_00255 | | hypothetical protein | insig. | 22 | 85 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS20740 | | hypothetical protein | cofit | 21 | 85 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2288 | | TRAP transporter solute receptor, TAXI family (RefSeq) | insig. | 23 | 66 |